Cheap flights from JAX to SAN (Jacksonville Intl. to San Diego Intl.)

Earn rewards on top of your airline miles with Orbitz Rewards

Many airlines offer flexible change policies

Sign up to receive text alerts about your trip

Cheap Flights from JAX to SAN starting at $80 One Way, $228 Round Trip

Prices starting at $228 for return flights and $80 for one-way flights to San Diego Intl. were the cheapest prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Wed, May 1 - Sat, May 11
JAX
Jacksonville
SAN
San Diego
$228 Roundtrip, found 7 hours ago
$228
Roundtrip
found 7 hours ago
Select Delta flight, departing Wed, May 1 from Jacksonville to San Diego, returning Sat, May 11, priced at $228 found 7 hours ago
Fri, May 17 - Thu, May 30
JAX
Jacksonville
SAN
San Diego
$231 Roundtrip, found 18 hours ago
$231
Roundtrip
found 18 hours ago
Select Frontier Airlines flight, departing Fri, May 17 from Jacksonville to San Diego, returning Thu, May 30, priced at $231 found 18 hours ago
Wed, May 1 - Mon, May 13
JAX
Jacksonville
SAN
San Diego
$238 Roundtrip, found 7 hours ago
$238
Roundtrip
found 7 hours ago
Select Delta flight, departing Wed, May 1 from Jacksonville to San Diego, returning Mon, May 13, priced at $238 found 7 hours ago
Mon, Apr 29 - Fri, May 10
JAX
Jacksonville
SAN
San Diego
$248 Roundtrip, found 13 hours ago
$248
Roundtrip
found 13 hours ago
Select United flight, departing Mon, Apr 29 from Jacksonville to San Diego, returning Fri, May 10, priced at $248 found 13 hours ago
Fri, May 31 - Tue, Jun 11
JAX
Jacksonville
SAN
San Diego
$304 Roundtrip, found 22 hours ago
$304
Roundtrip
found 22 hours ago
Select Frontier Airlines flight, departing Fri, May 31 from Jacksonville to San Diego, returning Tue, Jun 11, priced at $304 found 22 hours ago

Hotel Ideas near San Diego Intl.

Airport Hotels near San Diego Intl.

Wyndham Garden San Diego Near SeaWorld
Wyndham Garden San Diego Near SeaWorld
3 out of 5
3737 Sports Arena Blvd, San Diego, CA
The price is $113 per night from Apr 22 to Apr 23
$113
per night
Apr 22 - Apr 23
Stay at this business-friendly hotel in San Diego. Enjoy free WiFi, onsite parking, and a 24-hour front desk. Our guests praise the helpful staff and the clean ...
7/10 Good! (2,510 reviews)
"Homeless people around the property and hanging around the rooms , does not feel safe especially when we’re with family and babies"

Reviewed on Apr 14, 2024

Wyndham Garden San Diego Near SeaWorld
Wyndham San Diego Bayside
Wyndham San Diego Bayside
4 out of 5
1355 N Harbor Drive, San Diego, CA
The price is $154 per night from May 12 to May 13
$154
per night
May 12 - May 13
Stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 2 restaurants, and breakfast. Our guests praise the restaurant and the helpful staff in our ...
8/10 Very Good! (5,982 reviews)
"Solid hotel in great location."

Reviewed on Apr 13, 2024

Wyndham San Diego Bayside
Sheraton San Diego Hotel and Marina
Sheraton San Diego Hotel and Marina
4 out of 5
1380 Harbor Island Dr, San Diego, CA
The price is $180 per night from Apr 28 to Apr 29
$180
per night
Apr 28 - Apr 29
Stay at this business-friendly hotel in San Diego. Enjoy 3 outdoor pools, 6 restaurants, and a marina. Our guests praise the helpful staff and the clean rooms ...
7.6/10 Good! (2,255 reviews)
"Nice views of the marina, close to airport but quiet"

Reviewed on Apr 15, 2024

Sheraton San Diego Hotel and Marina
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Hotels In San Diego

Best Western Seven Seas
Best Western Seven Seas
3 out of 5
411 Hotel Circle South, San Diego, CA
The price is $94 per night from Apr 21 to Apr 22
$94
per night
Apr 21 - Apr 22
Stay at this business-friendly hotel in San Diego. Enjoy free WiFi, free parking, and 2 spa tubs. Our guests praise the pool and the helpful staff in our reviews. ...
7.4/10 Good! (2,432 reviews)
"Everything was pretty straightforward. Room was clean and quiet. Walking through the property, my son commented on how it felt like we were in Hawaii with some of the tall lush vegetation on the grounds. I would stay here again."

Reviewed on Apr 14, 2024

Best Western Seven Seas
Wyndham San Diego Bayside
Wyndham San Diego Bayside
4 out of 5
1355 N Harbor Drive, San Diego, CA
The price is $154 per night from May 12 to May 13
$154
per night
May 12 - May 13
Stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 2 restaurants, and breakfast. Our guests praise the restaurant and the helpful staff in our ...
8/10 Very Good! (5,982 reviews)
"Solid hotel in great location."

Reviewed on Apr 13, 2024

Wyndham San Diego Bayside
Wyndham Garden San Diego Near SeaWorld
Wyndham Garden San Diego Near SeaWorld
3 out of 5
3737 Sports Arena Blvd, San Diego, CA
The price is $113 per night from Apr 22 to Apr 23
$113
per night
Apr 22 - Apr 23
Stay at this business-friendly hotel in San Diego. Enjoy free WiFi, onsite parking, and a 24-hour front desk. Our guests praise the helpful staff and the clean ...
7/10 Good! (2,510 reviews)
"Homeless people around the property and hanging around the rooms , does not feel safe especially when we’re with family and babies"

Reviewed on Apr 14, 2024

Wyndham Garden San Diego Near SeaWorld
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

San Diego Hotels With Airport Transportation

Wyndham San Diego Bayside
Wyndham San Diego Bayside
4 out of 5
1355 N Harbor Drive, San Diego, CA
The price is $154 per night from May 12 to May 13
$154
per night
May 12 - May 13
Stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 2 restaurants, and breakfast. Our guests praise the restaurant and the helpful staff in our ...
8/10 Very Good! (5,982 reviews)
"Solid hotel in great location."

Reviewed on Apr 13, 2024

Wyndham San Diego Bayside
Sheraton San Diego Hotel and Marina
Sheraton San Diego Hotel and Marina
4 out of 5
1380 Harbor Island Dr, San Diego, CA
The price is $180 per night from Apr 28 to Apr 29
$180
per night
Apr 28 - Apr 29
Stay at this business-friendly hotel in San Diego. Enjoy 3 outdoor pools, 6 restaurants, and a marina. Our guests praise the helpful staff and the clean rooms ...
7.6/10 Good! (2,255 reviews)
"Nice views of the marina, close to airport but quiet"

Reviewed on Apr 15, 2024

Sheraton San Diego Hotel and Marina
Holiday Inn Express San Diego Airport - Old Town, an IHG Hotel
Holiday Inn Express San Diego Airport - Old Town, an IHG Hotel
2.5 out of 5
1955 San Diego Ave, San Diego, CA
The price is $175 per night from Apr 19 to Apr 20
$175
per night
Apr 19 - Apr 20
Stay at this business-friendly hotel in San Diego. Enjoy free breakfast, free WiFi, and a free airport shuttle. Our guests praise the breakfast and the helpful ...
8.8/10 Excellent! (1,176 reviews)
"Liked that they had an airport shuttle. Didnt like that it wasn't close to anything to walk to, and they didnt have a hot tub."

Reviewed on Apr 10, 2024

Holiday Inn Express San Diego Airport - Old Town, an IHG Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Low Priced San Diego Hotels

E-Z 8 Motel Old Town
E-Z 8 Motel Old Town
2.5 out of 5
4747 Pacific Highway, San Diego, CA
The price is $94 per night from Apr 17 to Apr 18
$94
per night
Apr 17 - Apr 18
Stay at this business-friendly hotel in San Diego. Enjoy free parking, WiFi, and a 24-hour front desk. Our guests praise the helpful staff and the clean rooms ...
5.8/10 (2,028 reviews)
Great Stay !
"I love the staff. I forgot the young gentlemens name , has dark hair . Has always been kind and the other girls name with Blonde hair 👱‍♀️. They are extra kind . Service was fast , excellent and got a wonderful room. Beds were comfy . Shower was nice and heated , room was decent I can’t complain. ..."

Reviewed on Apr 12, 2024

E-Z 8 Motel Old Town
Pleasant Inn
Pleasant Inn
2.5 out of 5
5550 Clairemont Mesa Blvd, San Diego, CA
The price is $108 per night from Apr 23 to Apr 24
$108
per night
Apr 23 - Apr 24
Stay at this hotel in San Diego. Enjoy free WiFi, free parking, and a 24-hour front desk. Our guests praise the helpful staff and the clean rooms in our reviews. ...
8.2/10 Very Good! (1,007 reviews)
"My third stay highly recommended place close to UC San Diego area"

Reviewed on Apr 13, 2024

Pleasant Inn
Kings Inn San Diego
Kings Inn San Diego
2.5 out of 5
1333 Hotel Cir S, San Diego, CA
The price is $98 per night from Apr 22 to Apr 23
$98
per night
Apr 22 - Apr 23
Stay at this hotel in San Diego. Enjoy free WiFi, 2 restaurants, and breakfast. Our guests praise the breakfast and the pool in our reviews. Popular attractions ...
8.6/10 Excellent! (2,604 reviews)
"We enjoyed our stay . Nice staff , great restaurants, clean and fun pool area ."

Reviewed on Apr 13, 2024

Kings Inn San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Family Friendly Hotels in San Diego

The Dana on Mission Bay
The Dana on Mission Bay
3.5 out of 5
1710 W Mission Bay Dr, San Diego, CA
The price is $168 per night from Apr 29 to Apr 30
$168
per night
Apr 29 - Apr 30
Stay at this family-friendly hotel in San Diego. Enjoy 2 outdoor pools, a marina, and 2 poolside bars. Our guests praise the breakfast and the pool in our reviews. ...
8.6/10 Excellent! (2,369 reviews)

Families like: Outdoor pools, playground, close to beach, extra beds/cribs

Travelers say...
"Right in the bay"

Reviewed on Apr 15, 2024

The Dana on Mission Bay
Bahia Resort Hotel
Bahia Resort Hotel
3.5 out of 5
998 W Mission Bay Dr, San Diego, CA
The price is $180 per night from Apr 29 to Apr 30
$180
per night
Apr 29 - Apr 30
Stay at this beach resort in San Diego. Enjoy free parking, a marina, and a beach locale. Our guests praise the pool and the restaurant in our reviews. Popular ...
8.4/10 Very Good! (1,259 reviews)

Families like: Outdoor pools, game room, on the beach, outdoor tennis courts

Quick getaway at Bahia resort
"Beautiful hotel with views of the ocean and a great restaurant. Very clean and loved everything about this hotel."

Reviewed on Apr 14, 2024

Bahia Resort Hotel
Catamaran Resort and Spa
Catamaran Resort and Spa
4 out of 5
3999 Mission Boulevard, San Diego, CA
The price is $197 per night from Apr 29 to Apr 30
$197
per night
Apr 29 - Apr 30
Stay at this beach resort in San Diego. Enjoy free WiFi, a beach locale, and 2 bars/lounges. Our guests praise the restaurant and the helpful staff in our reviews. ...
7.6/10 Good! (1,110 reviews)

Families like: Outdoor pools, game room, on the beach, bicycle rentals

Travelers say...
"Overall had a great experience. A little old fashioned but great staff and great location. Very peaceful."

Reviewed on Apr 11, 2024

Catamaran Resort and Spa
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Map To Nearby Hotels

JAX to SAN Route Info

Origin Airport
Destination Airport
Number Of Airlines Serving
Distance
Shortest Flight Departure Time
Shortest Flight Departure Date
JAX Address & GPS
Address:
2400 Yankee Clipper Drive
Jacksonville FL, 32218
United States
IATA Code:
JAX
Longitude:
-81.683053
Latitude:
30.491254
Time Zone:
America/New_York
SAN Address & GPS
Address:
Airport Drive
San Diego CA, 92101
United States
IATA Code:
SAN
Longitude:
-117.197312
Latitude:
32.731938
Time Zone:
America/Los_Angeles

Frequently asked questions

Am I able to catch a flight from Jacksonville, FL Airport (JAX-Jacksonville Intl.) to San Diego, CA Airport (SAN-San Diego Intl.) now?
Go right to the Covid-19 Travel Advisor for the most useful info on travel restrictions and quarantine when catching a flight from Jacksonville, FL Airport (JAX-Jacksonville Intl.) to San Diego, CA Airport (SAN-San Diego Intl.).
Are there non-stop flights from Jacksonville, FL Airport (JAX-Jacksonville Intl.) to San Diego Intl. Airport (SAN)?
Traveling from JAX to San Diego, CA Airport (SAN-San Diego Intl.) means you’ll need to change planes. But hey — that’s OK. American Airlines, United Airlines and Southwest Airlines offer flights with only one simple stopover.
What is the shortest flight from Jacksonville Intl. Airport to San Diego Airport?
Flying from Jacksonville, FL Airport (JAX-Jacksonville Intl.) to San Diego, CA Airport (SAN-San Diego Intl.) will take a minimum of 6 hours and 41 minutes. Enjoy a beverage and read a few magazines — this is your chance to chill out.
How many hours flight from JAX to San Diego, CA Airport (SAN-San Diego Intl.)?
It typically takes about 6 hours and 47 minutes to get from Jacksonville Intl. Airport to San Diego Airport. You’ll be on board for some time, so bring some entertainment, like a book or a few podcasts.
If I am not able to travel due to COVID-19, can I cancel my flight to San Diego, CA Airport (SAN-San Diego Intl.)?
We get that traveling right now has its challenges, so it’s good to know that many reservations booked through us are able to be cancelled or changed. If your travel plans to San Diego, CA Airport (SAN-San Diego Intl.) have been affected by COVID-19, a lot of airlines are making things easier by offering credits to use at a later date. Just sign in to your account and you’ll quickly see what options are available. Our Customer Service Portal is the place to go for more information.
Are there flights to San Diego, CA Airport (SAN-San Diego Intl.) with flexible change policies?
In most cases you’ll have the option to reschedule your flight to San Diego, CA Airport (SAN-San Diego Intl.) without a change fee. All you have to do then is pay the difference between the old flight and the new one. Look for the “no change fees” filter and book with confidence.
What airlines have the most flights from JAX to San Diego, CA Airport (SAN-San Diego Intl.)?
You’ll have to make one or more stopovers if you’re planning to fly from JAX to SAN. For now, there aren’t any airlines that offer nonstop flights on this route.

Fare, taxes & fees: Fares include all taxes and fees, except baggage fees. Rates shown reflect fares found by other Orbitz users over the past 7 days. Due to rapidly changing airline prices & seat availability, these fares may no longer be available.

Refunds/changes/cancellations: Itinerary changes, if permitted for the fare, will have a $30 service fee charged by Orbitz. Additional airline charges may apply.

Other conditions: Schedules, fares and rules are subject to change without notice. Seats are limited and may not be available on all flights/dates or in all markets. Lower fares may be available. Fares will not be honored retroactively or in exchange for any wholly/partially unused ticket. Tickets are non-transferable and non-refundable. Fare rules are provided for the selected itinerary before booking.