Cheap flights from JAX to SAN (Jacksonville Intl. to San Diego Intl.)

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Cheap Flights from JAX to SAN starting at $89 One Way, $173 Round Trip

Prices starting at $173 for return flights and $89 for one-way flights to San Diego Intl. were the cheapest prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Wed, Aug 26 - Sat, Aug 29
JAX
Jacksonville
SAN
San Diego
$173 Roundtrip, found 20 hours ago
$173
Roundtrip
found 20 hours ago
Select Breeze Airways flight, departing Wed, Aug 26 from Jacksonville to San Diego, returning Sat, Aug 29, priced at $173 found 20 hours ago
Sat, May 9 - Tue, May 12
JAX
Jacksonville
SAN
San Diego
$347 Roundtrip, found 18 hours ago
$347
Roundtrip
found 18 hours ago
Select JetBlue Airways flight, departing Sat, May 9 from Jacksonville to San Diego, returning Tue, May 12, priced at $347 found 18 hours ago
Sat, May 9 - Tue, May 12
JAX
Jacksonville
SAN
San Diego
$372 Roundtrip, found 18 hours ago
$372
Roundtrip
found 18 hours ago
Select American Airlines flight, departing Sat, May 9 from Jacksonville to San Diego, returning Tue, May 12, priced at $372 found 18 hours ago
Sat, May 9 - Tue, May 12
JAX
Jacksonville
SAN
San Diego
$372 Roundtrip, found 18 hours ago
$372
Roundtrip
found 18 hours ago
Select Southwest Airlines flight, departing Sat, May 9 from Jacksonville to San Diego, returning Tue, May 12, priced at $372 found 18 hours ago
Sat, May 9 - Tue, May 12
JAX
Jacksonville
SAN
San Diego
$394 Roundtrip, found 18 hours ago
$394
Roundtrip
found 18 hours ago
Select Delta flight, departing Sat, May 9 from Jacksonville to San Diego, returning Tue, May 12, priced at $394 found 18 hours ago

Hotel Ideas near San Diego Intl.

Airport Hotels near San Diego Intl.

Sheraton San Diego Resort

Sheraton San Diego Resort

4 out of 5
1380 Harbor Island Dr San Diego CA
$163 nightly
The price is $188 total per night from Apr 1 to Apr 2
$188 total
Apr 1 - Apr 2
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 3 outdoor pools, and 5 restaurants. Our guests praise the pool and the restaurant ...
8.4/10 Very Good! (3,390 reviews)
This hotel was absolutely breathtaking, upon checking in I had thee best service from the front desk clerks. When walking into our room we noticed the showers had mildew in the corners, and our balcony was not clean. I walked to the front desk and the girls were so helpful and got us into a new room. ...

Reviewed on Mar 25, 2026

Sheraton San Diego Resort
Wyndham San Diego Bayside

Wyndham San Diego Bayside

4 out of 5
1355 N Harbor Drive San Diego CA
$182 nightly
The price is $211 total per night from Mar 29 to Mar 30
$211 total
Mar 29 - Mar 30
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 3 restaurants, and breakfast (surcharge). Our guests praise the pool and the restaurant ...
8.4/10 Very Good! (6,065 reviews)
Room was okay a bit dated … Staff was nice helpful and accommodating!

Reviewed on Mar 25, 2026

Wyndham San Diego Bayside
The DEXTRO Little Italy, BW Premier Collection

The DEXTRO Little Italy, BW Premier Collection

3 out of 5
1617 1st Avenue San Diego CA
$146 nightly
The price is $169 total per night from Apr 5 to Apr 6
$169 total
Apr 5 - Apr 6
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, breakfast (surcharge), and a 24-hour fitness center. Our guests praise the helpful ...
8.8/10 Excellent! (1,254 reviews)
This hotel is in a great spot downtown, but be aware parking is $35 a day, so I chose to find street parking nearby instead. There is no elevator at the top floor of parking and you will have to walk alongside where cars are driving up. The cleanliness was excellent, the floor was very clean and ...

Reviewed on Mar 25, 2026

The DEXTRO Little Italy, BW Premier Collection
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Hotels In San Diego

Paradise Point Resort & Spa

Paradise Point Resort & Spa

4 out of 5
1404 Vacation Rd San Diego CA
$283 nightly
The price is $325 total per night from Apr 5 to Apr 6
$325 total
Apr 5 - Apr 6
Total with taxes and fees
Book a stay at this beach resort in San Diego. Enjoy free WiFi, 5 outdoor pools, and a full-service spa. Our guests praise the pool and the helpful staff in ...
8.8/10 Excellent! (2,475 reviews)
The location is very beautiful. The property sits on the water and has great views. The rooms are good size. The food was just ok, the location of the restaurant and bar are again very pretty . We waited 40 minutes one night to get some bread and a salad. We kept getting other people’s orders that ...

Reviewed on Mar 25, 2026

Paradise Point Resort & Spa
Best Western Seven Seas

Best Western Seven Seas

3 out of 5
411 Hotel Circle South San Diego CA
$82 nightly
The price is $94 total per night from Apr 1 to Apr 2
$94 total
Apr 1 - Apr 2
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, free parking, and 2 hot tubs. Our guests praise the pool and the restaurant in our ...
7.8/10 Good! (3,334 reviews)
Good location. Clean. Security on site.

Reviewed on Mar 25, 2026

Best Western Seven Seas
Hard Rock Hotel San Diego

Hard Rock Hotel San Diego

4 out of 5
207 5th Ave San Diego CA
$248 nightly
The price is $287 total per night from Apr 2 to Apr 3
$287 total
Apr 2 - Apr 3
Total with taxes and fees
Stay at this hotel in San Diego. Enjoy free WiFi, 2 restaurants, and a nightclub. Our guests praise the helpful staff and the convenient parking in our reviews. ...
9/10 Wonderful! (3,433 reviews)
Staff was friendly and the view from our room was spectacular

Reviewed on Mar 25, 2026

Hard Rock Hotel San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

San Diego Hotels With Airport Transportation

Wyndham San Diego Bayside

Wyndham San Diego Bayside

4 out of 5
1355 N Harbor Drive San Diego CA
$182 nightly
The price is $211 total per night from Mar 29 to Mar 30
$211 total
Mar 29 - Mar 30
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 3 restaurants, and breakfast (surcharge). Our guests praise the pool and the restaurant ...
8.4/10 Very Good! (6,065 reviews)
Room was okay a bit dated … Staff was nice helpful and accommodating!

Reviewed on Mar 25, 2026

Wyndham San Diego Bayside
Sheraton San Diego Resort

Sheraton San Diego Resort

4 out of 5
1380 Harbor Island Dr San Diego CA
$163 nightly
The price is $188 total per night from Apr 1 to Apr 2
$188 total
Apr 1 - Apr 2
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 3 outdoor pools, and 5 restaurants. Our guests praise the pool and the restaurant ...
8.4/10 Very Good! (3,390 reviews)
This hotel was absolutely breathtaking, upon checking in I had thee best service from the front desk clerks. When walking into our room we noticed the showers had mildew in the corners, and our balcony was not clean. I walked to the front desk and the girls were so helpful and got us into a new room. ...

Reviewed on Mar 25, 2026

Sheraton San Diego Resort
Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG

2.5 out of 5
1955 San Diego Ave San Diego CA
$136 nightly
The price is $156 total per night from Mar 30 to Mar 31
$156 total
Mar 30 - Mar 31
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free breakfast, free WiFi, and a free airport shuttle. Our guests praise the breakfast and the ...
9.2/10 Wonderful! (1,067 reviews)
Staff were amazing. Especially Nick, our unofficial tour guide.

Reviewed on Mar 24, 2026

Holiday Inn Express San Diego Airport - Old Town by IHG
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Low Priced San Diego Hotels

Pleasant Inn

Pleasant Inn

2.5 out of 5
5550 Clairemont Mesa Blvd San Diego CA
$94 nightly
The price is $107 total per night from Apr 5 to Apr 6
$107 total
Apr 5 - Apr 6
Total with taxes and fees
Stay at this hotel in San Diego. Enjoy free WiFi, free parking, and a 24-hour front desk. Our guests praise the helpful staff and the convenient parking in our ...
8.4/10 Very Good! (1,345 reviews)
The front desk staff was super nice and helpful. We were staying close to Scripps Hospital for a procedure and this location was great for that. The room was very clean and quiet.

Reviewed on Mar 24, 2026

Pleasant Inn
E-Z 8 Motel Old Town

E-Z 8 Motel Old Town

2.5 out of 5
4747 Pacific Highway San Diego CA
$70 nightly
The price is $81 total per night from Mar 29 to Mar 30
$81 total
Mar 29 - Mar 30
Total with taxes and fees
Book a stay at this business-friendly hotel in San Diego. Enjoy free parking, WiFi (surcharge), and a 24-hour front desk. Our guests praise the helpful staff ...
6.6/10 (2,095 reviews)
Friendly staff. Clean and simple motel. It has the essentials.

Reviewed on Mar 25, 2026

E-Z 8 Motel Old Town
Kings Inn San Diego

Kings Inn San Diego

2.5 out of 5
1333 Hotel Cir S San Diego CA
$113 nightly
The price is $129 total per night from Mar 30 to Mar 31
$129 total
Mar 30 - Mar 31
Total with taxes and fees
Stay at this hotel in San Diego. Enjoy free WiFi, 2 restaurants, and breakfast (surcharge). Our guests praise the breakfast and the pool in our reviews. Popular ...
8.8/10 Excellent! (3,639 reviews)
Might be ok for some but this place not for me

Reviewed on Mar 23, 2026

Kings Inn San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Family Friendly Hotels in San Diego

Bahia Resort Hotel

Bahia Resort Hotel

3.5 out of 5
998 W Mission Bay Dr San Diego CA
$277 nightly
The price is $318 total per night from Apr 12 to Apr 13
$318 total
Apr 12 - Apr 13
Total with taxes and fees
Book a stay at this beach resort in San Diego. Enjoy a beach locale, breakfast (surcharge), and 24-hour room service. Our guests praise the pool and the restaurant ...
8.6/10 Excellent! (1,931 reviews)
This place was amazing clean and staff was friendly and professional

Reviewed on Mar 25, 2026

Bahia Resort Hotel
The Dana on Mission Bay

The Dana on Mission Bay

3.5 out of 5
1710 W Mission Bay Dr San Diego CA
$204 nightly
The price is $234 total per night from Apr 5 to Apr 6
$234 total
Apr 5 - Apr 6
Total with taxes and fees
Stay at this hotel in San Diego. Enjoy 2 outdoor pools, a marina, and 2 hot tubs. Our guests praise the pool and the restaurant in our reviews. Popular attractions ...
9/10 Wonderful! (4,199 reviews)
Beautiful property with wonderful views. Pools and other amenities were all very clean and family friendly. The shuttle to Seaworld was such a win!

Reviewed on Mar 25, 2026

The Dana on Mission Bay
Catamaran Resort and Spa

Catamaran Resort and Spa

4 out of 5
3999 Mission Boulevard San Diego CA
$300 nightly
The price is $345 total per night from Apr 19 to Apr 20
$345 total
Apr 19 - Apr 20
Total with taxes and fees
Book a stay at this beach resort in San Diego. Enjoy free WiFi, a full-service spa, and a beach locale. Our guests praise the helpful staff and the clean rooms ...
8.6/10 Excellent! (1,199 reviews)

Families like: Outdoor pool, game room, on the beach, bicycle rentals

Travelers say...
Check in was quick. Wish we would have been given instructions on how to operate tv and connect to WiFi. We were given list of restaurants nearby, etc. But would have been helpful to have a map of the area. Also, housekeeping was inconsistent. Some days, no water, some days not enough towels, and ...

Reviewed on Mar 25, 2026

Catamaran Resort and Spa
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

JAX to SAN Route Info

Origin Airport
Destination Airport
Number Of Airlines Serving
Distance
Shortest Flight Departure Time
Shortest Flight Departure Date
JAX Address & GPS
Address:
2400 Yankee Clipper Drive
Jacksonville FL, 32218
United States
IATA Code:
JAX
Longitude:
-81.683053
Latitude:
30.491254
Time Zone:
America/New_York
SAN Address & GPS
Address:
Airport Drive
San Diego CA, 92101
United States
IATA Code:
SAN
Longitude:
-117.197312
Latitude:
32.731938
Time Zone:
America/Los_Angeles

Frequently asked questions

Are there non-stop flights from JAX to SAN?
Flying from Jacksonville Intl. Airport to San Diego Airport means you'll need to switch planes. But hey — that's OK. American Airlines, United Airlines and Delta Air Lines offer flights with just a single stopover.
What is the shortest flight from Jacksonville Intl. Airport (JAX) to SAN?
The shortest flight time from Jacksonville to San Diego is around 7 hours and 12 minutes. Order a wine from the drink cart, perfect your travel itinerary or read a few magazines — you'll have enough time on this medium-haul journey.
How many hours flight from Jacksonville Intl. Airport (JAX) to SAN?
The flight from Jacksonville Intl. Airport (JAX) to SAN will take roughly 7 hours and 18 minutes. A couple of good movies, some journaling and a bit of shut-eye will help make time zip by.
What airlines have the most flights from Jacksonville Intl. Airport (JAX) to San Diego Intl. Airport (SAN)?
For now, there are no airlines that fly direct from Jacksonville Intl. Airport (JAX) to San Diego Intl. Airport (SAN). Don't panic though! There are plenty of single or multi-stop flights available.

Map To Nearby Hotels

Fare, taxes & fees: Fares include all taxes and fees, except baggage fees. Rates shown reflect fares found by other Orbitz users over the past 7 days. Due to rapidly changing airline prices & seat availability, these fares may no longer be available.

Refunds/changes/cancellations: Itinerary changes, if permitted for the fare, will have a $30 service fee charged by Orbitz. Additional airline charges may apply.

Other conditions: Schedules, fares and rules are subject to change without notice. Seats are limited and may not be available on all flights/dates or in all markets. Lower fares may be available. Fares will not be honored retroactively or in exchange for any wholly/partially unused ticket. Tickets are non-transferable and non-refundable. Fare rules are provided for the selected itinerary before booking.

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