$47 Cheap flight deals from San Francisco (SJC) to San Juan Island (SEA)

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This Weekend's Flight Deals from San Francisco to San Juan Island

This weekend's flight prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Sun, Jun 8 - Thu, Jun 12
SFO
San Francisco Intl.
SEA
Seattle - Tacoma Intl.
$343 Roundtrip, just found
$343
Roundtrip
just found
Select Frontier Airlines flight, departing Sun, Jun 8 from San Francisco Intl. to Seattle - Tacoma Intl., returning Thu, Jun 12, priced at $343 just found
Sat, Jun 7 - Fri, Jun 13
OAK
Oakland Intl.
SEA
Seattle - Tacoma Intl.
$362 Roundtrip, just found
$362
Roundtrip
just found
Select Alaska Airlines flight, departing Sat, Jun 7 from Oakland Intl. to Seattle - Tacoma Intl., returning Fri, Jun 13, priced at $362 just found
Sun, Jun 8 - Thu, Jun 12
SJC
Norman Y. Mineta San Jose Intl.
SEA
Seattle - Tacoma Intl.
$516 Roundtrip, just found
$516
Roundtrip
just found
Select Spirit Airlines flight, departing Sun, Jun 8 from Norman Y. Mineta San Jose Intl. to Seattle - Tacoma Intl., returning Thu, Jun 12, priced at $516 just found
Sat, Jun 7 - Tue, Jun 17
SFO
San Francisco Intl.
BLI
Bellingham Intl.
$590 Roundtrip, found 10 hours ago
$590
Roundtrip
found 10 hours ago
Select Hawaiian Airlines flight, departing Sat, Jun 7 from San Francisco Intl. to Bellingham Intl., returning Tue, Jun 17, priced at $590 found 10 hours ago

Airfares from $47 One Way, $131 Round Trip from San Francisco to San Juan Island

Prices starting at $131 for return flights and $47 for one-way flights to San Juan Island were the cheapest prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Wed, Aug 6 - Wed, Aug 13
SFO
San Francisco
SEA
Seattle
$131 Roundtrip, found 16 hours ago
$131
Roundtrip
found 16 hours ago
Select Alaska Airlines flight, departing Wed, Aug 6 from San Francisco to Seattle, returning Wed, Aug 13, priced at $131 found 16 hours ago
Sun, Sep 28 - Sun, Oct 5
SJC
San Jose
PAE
Seattle
$212 Roundtrip, found 1 day ago
$212
Roundtrip
found 1 day ago
Select Frontier Airlines flight, departing Sun, Sep 28 from San Jose to Seattle, returning Sun, Oct 5, priced at $212 found 1 day ago
Sat, Oct 4 - Thu, Oct 16
SFO
San Francisco
BLI
Bellingham
$228 Roundtrip, found 14 hours ago
$228
Roundtrip
found 14 hours ago
Select Hawaiian Airlines flight, departing Sat, Oct 4 from San Francisco to Bellingham, returning Thu, Oct 16, priced at $228 found 14 hours ago
Wed, Aug 6 - Tue, Aug 12
OAK
Oakland
BLI
Bellingham
$230 Roundtrip, found 1 day ago
$230
Roundtrip
found 1 day ago
Select Hawaiian Airlines flight, departing Wed, Aug 6 from Oakland to Bellingham, returning Tue, Aug 12, priced at $230 found 1 day ago
Fri, Oct 3 - Sat, Oct 11
SJC
San Jose
BLI
Bellingham
$236 Roundtrip, found 1 day ago
$236
Roundtrip
found 1 day ago
Select Alaska Airlines flight, departing Fri, Oct 3 from San Jose to Bellingham, returning Sat, Oct 11, priced at $236 found 1 day ago

San Juan Island economy flight packages

Price found within the past 48 hours. Click for updated prices.
Lotte Hotel Seattle
5.0-star property

Lotte Hotel Seattle

9.4/10 Exceptional! (890 reviews)

Jul 17 - Jul 20

3 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Coach

Seattle (SEA) to Oakland (OAK)

Southwest Airlines • Coach
Save 100% on your flight
per person
found 1 day ago
Check in gal, jasmine was AMAZING. Very friendly. All the gentlmen that were doing vallet were also very respectful and friendly! The rooms were so great and clean! Definitely will be staying there again!

Reviewed on May 19, 2025

1 Hotel Seattle
5.0-star property

1 Hotel Seattle

8.6/10 Excellent! (17 reviews)

Jul 10 - Jul 13

3 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Coach

Seattle (SEA) to Oakland (OAK)

Southwest Airlines • Coach
Save 100% on your flight
per person
found 1 day ago
This was our third time staying at this particular hotel in the last 10 years so we have a history to compare it to. It will be the last time we stay here. For the room price and the options that you have to DEPEND on the hotel staff to provide for you in a timely manner, it wasn't worth it. Nice property to look at though

Reviewed on May 27, 2025

Level Seattle Downtown - South Lake Union
3.5-star property

Level Seattle Downtown - South Lake Union

9/10 Wonderful! (916 reviews)

Jul 24 - Jul 27

3 night stay

San Francisco (SFO) to Seattle (SEA)

Delta • Roundtrip • Coach
Save 100% on your flight
per person
found 1 day ago
Loved this property! Excellent pricing for what we needed. Can’t wait to try this brand in another city.

Reviewed on Aug 13, 2024

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San Juan Island packages with premium economy flights

Price found within the past 48 hours. Click for updated prices.
Mediterranean Inn
3.0-star property

Mediterranean Inn

9.2/10 Wonderful! (5,206 reviews)

Jul 8 - Jul 11

3 night stay

San Jose (SJC) to Seattle (SEA)

Delta • Roundtrip • PremiumEconomy
per person
found 1 day ago
Location & staff were excrptional but all was rrally good

Reviewed on May 23, 2025

Lotte Hotel Seattle
5.0-star property

Lotte Hotel Seattle

9.4/10 Exceptional! (890 reviews)

Jul 8 - Jul 11

3 night stay

San Jose (SJC) to Seattle (SEA)

Delta • Roundtrip • PremiumEconomy
per person
found 1 day ago
Check in gal, jasmine was AMAZING. Very friendly. All the gentlmen that were doing vallet were also very respectful and friendly! The rooms were so great and clean! Definitely will be staying there again!

Reviewed on May 19, 2025

WorldMark Seattle - The Camlin
2.5-star property

WorldMark Seattle - The Camlin

7/10 Good! (26 reviews)

Jul 8 - Jul 11

3 night stay

San Jose (SJC) to Seattle (SEA)

Delta • Roundtrip • PremiumEconomy
per person
found 1 day ago
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San Juan Island business class flight packages

Price found within the past 48 hours. Click for updated prices.
The Inn at Virginia Mason
2.5-star property

The Inn at Virginia Mason

7.6/10 Good! (1,077 reviews)

Jul 18 - Jul 23

5 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Roundtrip • BusinessClass
per person
found 1 day ago
The staff was exceptionally friendly and helpful which is amazing when you have a family member in the hospital.

Reviewed on May 19, 2025

Lotte Hotel Seattle
5.0-star property

Lotte Hotel Seattle

9.4/10 Exceptional! (890 reviews)

Jul 18 - Jul 23

5 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Roundtrip • BusinessClass
Save 100% on your flight
per person
found 1 day ago
Check in gal, jasmine was AMAZING. Very friendly. All the gentlmen that were doing vallet were also very respectful and friendly! The rooms were so great and clean! Definitely will be staying there again!

Reviewed on May 19, 2025

1 Hotel Seattle
5.0-star property

1 Hotel Seattle

8.6/10 Excellent! (17 reviews)

Jul 18 - Jul 23

5 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Roundtrip • BusinessClass
Save 100% on your flight
per person
found 1 day ago
This was our third time staying at this particular hotel in the last 10 years so we have a history to compare it to. It will be the last time we stay here. For the room price and the options that you have to DEPEND on the hotel staff to provide for you in a timely manner, it wasn't worth it. Nice property to look at though

Reviewed on May 27, 2025

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San Juan Island first class flight packages

Price found within the past 48 hours. Click for updated prices.
The Inn at Virginia Mason
2.5-star property

The Inn at Virginia Mason

7.6/10 Good! (1,077 reviews)

Jul 16 - Jul 20

4 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Roundtrip • FirstClass
per person
found 1 day ago
The staff was exceptionally friendly and helpful which is amazing when you have a family member in the hospital.

Reviewed on May 19, 2025

Coast Seattle Downtown Hotel by APA
4.0-star property

Coast Seattle Downtown Hotel by APA

8.8/10 Excellent! (1,374 reviews)

Jul 16 - Jul 20

4 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Roundtrip • FirstClass
per person
found 1 day ago
Great location and very clean.

Reviewed on Mar 22, 2025

citizenM Seattle Pioneer Square
4.0-star property

citizenM Seattle Pioneer Square

9.2/10 Wonderful! (3,302 reviews)

Jul 16 - Jul 20

4 night stay

Oakland (OAK) to Seattle (SEA)

Alaska Airlines • Roundtrip • FirstClass
per person
found 1 day ago
Great atmosphere, kind staff

Reviewed on May 7, 2025

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More About Flying To San Juan Island from San Francisco

Route Information for Flights from San Francisco to San Juan Island

Origin Airport IATA Code
SJC
Destination Airport IATA Code
SEA
Distance
Direct Flight Airlines
Earliest Flight Arrival
Latest Flight Arrival

San Francisco to San Juan Island

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Fare, taxes & fees: Fares include all taxes and fees, except baggage fees. Rates shown reflect fares found by other Orbitz users over the past 7 days. Due to rapidly changing airline prices & seat availability, these fares may no longer be available.

Refunds/changes/cancellations: Itinerary changes, if permitted for the fare, will have a $30 service fee charged by Orbitz. Additional airline charges may apply.

Other conditions: Schedules, fares and rules are subject to change without notice. Seats are limited and may not be available on all flights/dates or in all markets. Lower fares may be available. Fares will not be honored retroactively or in exchange for any wholly/partially unused ticket. Tickets are non-transferable and non-refundable. Fare rules are provided for the selected itinerary before booking.