$775 Cheap flight deals from San Juan (SJU) to Tokyo (TYO)

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This Weekend's Flight Deals from San Juan to Tokyo

This weekend's flight prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Sun, Jun 14 - Wed, Jun 24
SJU
Luis Munoz Marin Intl.
HND
Haneda
$3,176 Roundtrip, found 5 days ago
$3,176
Roundtrip
found 5 days ago
Select Turkish Airlines flight, departing Sun, Jun 14 from Luis Munoz Marin Intl. to Haneda, returning Wed, Jun 24, priced at $3,176 found 5 days ago

Airfares from $775 One Way, $1,411 Round Trip from San Juan to Tokyo

Prices starting at $1,411 for return flights and $775 for one-way flights to Tokyo were the cheapest prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Wed, Oct 28 - Wed, Nov 4
SJU
San Juan
HND
Tokyo
$1,411 Roundtrip, found 5 days ago
$1,411
Roundtrip
found 5 days ago
Select American Airlines flight, departing Wed, Oct 28 from San Juan to Tokyo, returning Wed, Nov 4, priced at $1,411 found 5 days ago
Tue, Sep 1 - Tue, Sep 15
SJU
San Juan
NRT
Tokyo
$1,412 Roundtrip, just found
$1,412
Roundtrip
just found
Select United flight, departing Tue, Sep 1 from San Juan to Tokyo, returning Tue, Sep 15, priced at $1,412 just found
Tue, Sep 1 - Tue, Sep 15
SJU
San Juan
HND
Tokyo
$1,412 Roundtrip, just found
$1,412
Roundtrip
just found
Select United flight, departing Tue, Sep 1 from San Juan to Tokyo, returning Tue, Sep 15, priced at $1,412 just found
Tue, Sep 1 - Tue, Sep 15
SJU
San Juan
HND
Tokyo
$1,459 Roundtrip, just found
$1,459
Roundtrip
just found
Select Japan Airlines flight, departing Tue, Sep 1 from San Juan to Tokyo, returning Tue, Sep 15, priced at $1,459 just found
Sat, Jul 11 - Thu, Jul 16
SJU
San Juan
NRT
Tokyo
$1,534 Roundtrip, found 2 days ago
$1,534
Roundtrip
found 2 days ago
Select Etihad Airways flight, departing Sat, Jul 11 from San Juan to Tokyo, returning Thu, Jul 16, priced at $1,534 found 2 days ago

Tokyo economy flight packages

Price found within the past 48 hours. Click for updated prices.
MONday Apart NIHOMBASHI NINGYOCHO
4.0-star property

MONday Apart NIHOMBASHI NINGYOCHO

9.6/10 Exceptional! (307 reviews)

Jul 18 - Jul 25

7 night stay

San Juan (SJU) to Tokyo (HND)

United • Non-stop roundtrip • Coach
Price was $3,700, price is now $2,558 per person
$2,558
per person
found 20 hours ago
I liked that it was close to TCAT which made it convenient to get to the airport. We did not sleep well because the AC did not work well. The staff is very nice. We were able to store our luggage before check in. Not much to do walking from the hotel.

Reviewed on Jul 14, 2025

NIPPONIA Sawara Merchant Town Hotel
3.5-star property

NIPPONIA Sawara Merchant Town Hotel

8.8/10 Excellent! (22 reviews)

Jul 18 - Jul 25

7 night stay

San Juan (SJU) to Tokyo (HND)

United • Non-stop roundtrip • Coach
Price was $4,788, price is now $3,584 per person
$3,584
per person
found 20 hours ago
Tokyo Bay Shiomi Prince Hotel
4.0-star property

Tokyo Bay Shiomi Prince Hotel

9.6/10 Exceptional! (5,234 reviews)

Jul 18 - Jul 25

7 night stay

San Juan (SJU) to Tokyo (HND)

United • Non-stop roundtrip • Coach
Price was $3,481, price is now $2,612 per person
$2,612
per person
found 20 hours ago
Everything was espectacular

Reviewed on Jun 5, 2026

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More About Flying To Tokyo from San Juan

Route Information for Flights from San Juan to Tokyo

Origin Airport IATA Code
SJU
Destination Airport IATA Code
TYO
Distance
Direct Flight Airlines
Earliest Flight Arrival
Latest Flight Arrival

San Juan to Tokyo

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Orbitz Makes It Easy to Plan Your Trips on a Budget

You can always find affordable flights from San Juan to Tokyo on Orbitz. Use different airlines to book arrival and departure flights, take advantage of vacation package deals, and secure exclusive rewards.

Frequently asked questions

What is the shortest flight from San Juan to Tokyo?
With a minimum flight time of 17 hours and 26 minutes, it's a wise idea to be as comfortable as possible. Built up some nice air points? This might be a good opportunity to upgrade to a seat with more legroom on your San Juan to Tokyo journey.
What is the cheapest day of the week to fly?
Consider flying out early in the week to save on your airfare. Orbitz data from 2021 shows that Monday is the cheapest day to depart, followed by Tuesday. Saturday showed the highest average ticket prices likely because many travelers prefer to start their vacation on a weekend.
What is the cheapest month to fly?
We won't keep you guessing, according to Orbitz data from 2021, the cheapest month to fly is February. Perfect for those who need a weekend getaway, or just a break from it all in the shortest month of the year. Be aware that the most expensive time to fly is during the height of summer in July, and in the holiday month of December.*According to flight demand on Orbitz.com from January to December 2021. Savings are subject to change based on departure location, date and destination.

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Fare, taxes & fees: Fares include all taxes and fees, except baggage fees. Rates shown reflect fares found by other Orbitz users over the past 7 days. Due to rapidly changing airline prices & seat availability, these fares may no longer be available.

Refunds/changes/cancellations: Itinerary changes, if permitted for the fare, will have a $30 service fee charged by Orbitz. Additional airline charges may apply.

Other conditions: Schedules, fares and rules are subject to change without notice. Seats are limited and may not be available on all flights/dates or in all markets. Lower fares may be available. Fares will not be honored retroactively or in exchange for any wholly/partially unused ticket. Tickets are non-transferable and non-refundable. Fare rules are provided for the selected itinerary before booking.