$65 Cheap flight deals from Jacksonville (JAX) to San Juan (SJU)

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This Weekend's Flight Deals from Jacksonville to San Juan

This weekend's flight prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Fri, Jan 2 - Mon, Jan 12
JAX
Jacksonville Intl.
SJU
Luis Munoz Marin Intl.
$304 Roundtrip, found 10 hours ago
$304
Roundtrip
found 10 hours ago
Select Frontier Airlines flight, departing Fri, Jan 2 from Jacksonville Intl. to Luis Munoz Marin Intl., returning Mon, Jan 12, priced at $304 found 10 hours ago
Sun, Jan 4 - Tue, Jan 13
GNV
Gainesville Regional
SJU
Luis Munoz Marin Intl.
$600 Roundtrip, found 9 hours ago
$600
Roundtrip
found 9 hours ago
Select Delta flight, departing Sun, Jan 4 from Gainesville Regional to Luis Munoz Marin Intl., returning Tue, Jan 13, priced at $600 found 9 hours ago

Airfares from $65 One Way, $152 Round Trip from Jacksonville to San Juan

Prices starting at $152 for return flights and $65 for one-way flights to San Juan were the cheapest prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Sat, Feb 21 - Sat, Feb 28
JAX
Jacksonville
SJU
San Juan
$152 Roundtrip, found 1 day ago
$152
Roundtrip
found 1 day ago
Select Frontier Airlines flight, departing Sat, Feb 21 from Jacksonville to San Juan, returning Sat, Feb 28, priced at $152 found 1 day ago
Sun, Jan 18 - Thu, Jan 29
JAX
Jacksonville
SJU
San Juan
$155 Roundtrip, found 2 days ago
$155
Roundtrip
found 2 days ago
Select Frontier Airlines flight, departing Sun, Jan 18 from Jacksonville to San Juan, returning Thu, Jan 29, priced at $155 found 2 days ago
Sat, Feb 21 - Mon, Feb 23
JAX
Jacksonville
SJU
San Juan
$166 Roundtrip, found 1 day ago
$166
Roundtrip
found 1 day ago
Select Frontier Airlines flight, departing Sat, Feb 21 from Jacksonville to San Juan, returning Mon, Feb 23, priced at $166 found 1 day ago
Mon, Apr 6 - Wed, Apr 22
JAX
Jacksonville
SJU
San Juan
$178 Roundtrip, found 2 days ago
$178
Roundtrip
found 2 days ago
Select JetBlue Airways flight, departing Mon, Apr 6 from Jacksonville to San Juan, returning Wed, Apr 22, priced at $178 found 2 days ago
Wed, Feb 18 - Wed, Feb 25
JAX
Jacksonville
SJU
San Juan
$195 Roundtrip, found 9 hours ago
$195
Roundtrip
found 9 hours ago
Select Delta flight, departing Wed, Feb 18 from Jacksonville to San Juan, returning Wed, Feb 25, priced at $195 found 9 hours ago

San Juan economy flight packages

Price found within the past 48 hours. Click for updated prices.
The Oliver Hotel
3.0-star property

The Oliver Hotel

9/10 Wonderful! (50 reviews)

Feb 11 - Feb 15

4 night stay

Jacksonville (JAX) to San Juan (SJU)

American Airlines • Non-stop • Coach

San Juan (SJU) to Jacksonville (JAX)

Frontier Airlines • Non-stop • Coach
Price was $1,129, price is now $666 per person
$666
per person
found 1 day ago
Aire de O:live
4.0-star property

Aire de O:live

9/10 Wonderful! (328 reviews)

Feb 13 - Feb 21

8 night stay

Daytona Beach (DAB) to San Juan (SJU)

American Airlines • Non-stop roundtrip • Coach
Save 100% on your flight
Price was $4,267, price is now $2,385 per person
$2,385
per person
found 1 hour ago
The staff were all fantastic. Very nice people. I wasn't crazy about the room. The windows are like an office building- they don't open. The Wifi was quite spotty. The sliding door for the toilet didnt work. The clothes closet didn't close properly. The bathroom sink was beautiful but the joystick spout was weird. Small complaints, really. But I would really have loved an open window...Great beach!

Reviewed on Apr 9, 2025

Olive Boutique Hotel, A Small Luxury Hotel of the World (Adults Only)
4.0-star property

Olive Boutique Hotel, A Small Luxury Hotel of the World (Adults Only)

9/10 Wonderful! (645 reviews)

Feb 21 - Feb 26

5 night stay

Jacksonville (JAX) to San Juan (SJU)

American Airlines • Non-stop • Coach

San Juan (SJU) to Jacksonville (JAX)

Frontier Airlines • Non-stop • Coach
Save 100% on your flight
Price was $1,828, price is now $1,064 per person
$1,064
per person
found 1 day ago
Gorgeous, unique property. If you cannot stand the chain hotels and need a little character in your hotel, you will LOVE Olive. The rest is also amazing 5 star all the way.

Reviewed on Aug 9, 2025

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San Juan first class flight packages

Price found within the past 48 hours. Click for updated prices.
ESJ Beach Hotel
3.5-star property

ESJ Beach Hotel

6.8/10 (4,221 reviews)

Feb 18 - Feb 21

3 night stay

Jacksonville (JAX) to San Juan (SJU)

Delta • Non-stop • FirstClass

San Juan (SJU) to Jacksonville (JAX)

United • Non-stop • FirstClass
Price was $1,196, price is now $969 per person
$969
per person
found 7 hours ago
Great view and great staff

Reviewed on Jul 14, 2025

Aire de O:live
4.0-star property

Aire de O:live

9/10 Wonderful! (328 reviews)

Feb 18 - Feb 21

3 night stay

Jacksonville (JAX) to San Juan (SJU)

Delta • Non-stop • FirstClass

San Juan (SJU) to Jacksonville (JAX)

United • Non-stop • FirstClass
Price was $1,961, price is now $1,355 per person
$1,355
per person
found 7 hours ago
The staff were all fantastic. Very nice people. I wasn't crazy about the room. The windows are like an office building- they don't open. The Wifi was quite spotty. The sliding door for the toilet didnt work. The clothes closet didn't close properly. The bathroom sink was beautiful but the joystick spout was weird. Small complaints, really. But I would really have loved an open window...Great beach!

Reviewed on Apr 9, 2025

Hyatt Regency Grand Reserve Puerto Rico
4.0-star property

Hyatt Regency Grand Reserve Puerto Rico

9/10 Wonderful! (2,764 reviews)

Feb 18 - Feb 21

3 night stay

Jacksonville (JAX) to San Juan (SJU)

Delta • Non-stop • FirstClass

San Juan (SJU) to Jacksonville (JAX)

United • Non-stop • FirstClass
Price was $1,843, price is now $1,495 per person
$1,495
per person
found 7 hours ago
Great resort with a lot of amenities and for a reasonable price. The location on the island is far enough away from everything to feel secluded but close enough to get into town for shopping or nightlife if desired. I’d go back for sure.

Reviewed on Nov 11, 2025

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More About Flying To San Juan from Jacksonville

Route Information for Flights from Jacksonville to San Juan

Origin Airport IATA Code
JAX
Destination Airport IATA Code
SJU
Distance
Direct Flight Airlines
Earliest Flight Arrival
Latest Flight Arrival

Jacksonville to San Juan

Grab great fares on Jacksonville to San Juan flights with Orbitz, your #1 source for discount international and domestic air tickets. Our cutting-edge mobile tools and great online search functionality make booking your next budget trip a breeze.

Mobile Apps for Exclusive Deals on Flights From Jacksonville to San Juan

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Find Your Jacksonville to San Juan Flights, Car, and Hotel in One Place

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Earn Miles for Flights From Jacksonville to San Juan

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Frequently asked questions

Am I able to catch a flight from Jacksonville to San Juan now?
Our Covid-19 Travel Advisor will answer all your questions about travel restrictions and quarantine requirements when flying from Jacksonville to San Juan.
Are there non-stop flights from Jacksonville to San Juan?
Yes, if you're traveling from Orlando Intl. Airport to SJU, you'll only have one flight number to bear in mind. There are 3 airlines with nonstop services to choose from. Some of the best are:
  • JetBlue
  • Spirit Airlines
  • Frontier Airlines
  • JetBlue
  • Spirit Airlines
  • Frontier Airlines
What is the shortest flight from Jacksonville to San Juan?
From Jacksonville, the eclectic sights and sounds of San Juan are at least 3 hours and 45 minutes away. Secure your favorite seat, or maybe even upgrade to one with a little more legroom, and travel to your destination in pure comfort.
What airlines fly from Jacksonville to San Juan most frequently?
There are a couple of airlines offering frequent flights from Orlando, FL Airport (MCO-Orlando Intl.) to Isla Verde Intl. Airport, including JetBlue (B6). Popular with travelers, it operates 182 flights on this route each month. If you can't find the right flight for you there, look into the airfares with Spirit Airlines (NK). This carrier is a terrific alternative and has 121 flights between Jacksonville and San Juan each month.
If I am not able to travel due to COVID-19, can I cancel my flight to San Juan?
We get that traveling right now has its challenges, so it's good to know that many reservations booked through us are able to be cancelled or changed. If your travel plans to San Juan have been affected by COVID-19, a lot of airlines are making things easier by offering credits to use at a later date. Just sign in to your account and you'll quickly see what options are available. Our Customer Service Portal is the place to go for more information.
Are there flights to San Juan with flexible change policies?
In most cases you'll have the option to reschedule your flight to San Juan without a change fee. All you have to do then is pay the difference between the old flight and the new one. Look for the "no change fees" filter and book with confidence.
What is the cheapest day of the week to fly?
Consider flying out early in the week to save on your airfare. Orbitz data from 2020 shows that Monday is the cheapest day to depart, followed by Tuesday. Saturday showed the highest average ticket prices likely because many travelers prefer to start their vacation on a weekend.
What is the cheapest month to fly?
We won't keep you guessing, according to Orbitz data the cheapest month to fly is August. Perfect for those who need a weekend getaway, or just a break from it all before the weather changes. Be aware that the most expensive time to fly is the height of summer, with ticket prices peaking in the month of June.
How can I save money on flights?
To really save big on your next vacation, think outside the box. Select two different airlines or fare types for your return trip and you'll generally get a much better deal. Those who tried this on Orbitz in 2020 saved up to 45% on their airfares. Get mixing and matching today!

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Fare, taxes & fees: Fares include all taxes and fees, except baggage fees. Rates shown reflect fares found by other Orbitz users over the past 7 days. Due to rapidly changing airline prices & seat availability, these fares may no longer be available.

Refunds/changes/cancellations: Itinerary changes, if permitted for the fare, will have a $30 service fee charged by Orbitz. Additional airline charges may apply.

Other conditions: Schedules, fares and rules are subject to change without notice. Seats are limited and may not be available on all flights/dates or in all markets. Lower fares may be available. Fares will not be honored retroactively or in exchange for any wholly/partially unused ticket. Tickets are non-transferable and non-refundable. Fare rules are provided for the selected itinerary before booking.