$88 Cheap flight deals from Jacksonville (JAX) to San Juan (SJU)

Earn rewards on top of your airline miles with Orbitz Rewards

Many airlines offer flexible change policies

Sign up to receive text alerts about your trip

This Weekend's Flight Deals from Jacksonville to San Juan

This weekend's flight prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Fri, Jul 18 - Mon, Jul 21
JAX
Jacksonville Intl.
SJU
Luis Munoz Marin Intl.
$191 Roundtrip, found 9 hours ago
$191
Roundtrip
found 9 hours ago
Select Frontier Airlines flight, departing Fri, Jul 18 from Jacksonville Intl. to Luis Munoz Marin Intl., returning Mon, Jul 21, priced at $191 found 9 hours ago

Airfares from $88 One Way, $168 Round Trip from Jacksonville to San Juan

Prices starting at $168 for return flights and $88 for one-way flights to San Juan were the cheapest prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Fri, Aug 1 - Sun, Aug 10
JAX
Jacksonville
SJU
San Juan
$168 Roundtrip, found 10 hours ago
$168
Roundtrip
found 10 hours ago
Select Frontier Airlines flight, departing Fri, Aug 1 from Jacksonville to San Juan, returning Sun, Aug 10, priced at $168 found 10 hours ago
Sun, Jul 27 - Sat, Aug 2
JAX
Jacksonville
SJU
San Juan
$171 Roundtrip, found 2 hours ago
$171
Roundtrip
found 2 hours ago
Select Frontier Airlines flight, departing Sun, Jul 27 from Jacksonville to San Juan, returning Sat, Aug 2, priced at $171 found 2 hours ago
Mon, Jul 28 - Fri, Aug 1
JAX
Jacksonville
SJU
San Juan
$172 Roundtrip, found 11 hours ago
$172
Roundtrip
found 11 hours ago
Select Frontier Airlines flight, departing Mon, Jul 28 from Jacksonville to San Juan, returning Fri, Aug 1, priced at $172 found 11 hours ago
Fri, Sep 19 - Tue, Sep 30
JAX
Jacksonville
SJU
San Juan
$235 Roundtrip, found 8 hours ago
$235
Roundtrip
found 8 hours ago
Select American Airlines flight, departing Fri, Sep 19 from Jacksonville to San Juan, returning Tue, Sep 30, priced at $235 found 8 hours ago
Mon, Nov 10 - Sat, Nov 15
JAX
Jacksonville
SJU
San Juan
$250 Roundtrip, found 7 hours ago
$250
Roundtrip
found 7 hours ago
Select Southwest Airlines flight, departing Mon, Nov 10 from Jacksonville to San Juan, returning Sat, Nov 15, priced at $250 found 7 hours ago

San Juan economy flight packages

Price found within the past 48 hours. Click for updated prices.
The Wave Hotel at Condado
3.0-star property

The Wave Hotel at Condado

7.6/10 Good! (1,221 reviews)

Aug 31 - Sep 7

7 night stay

Jacksonville (JAX) to San Juan (SJU)

Delta • Non-stop • Coach

San Juan (SJU) to Jacksonville (JAX)

Frontier Airlines • Non-stop • Coach
Save 100% on your flight
per person
found 1 day ago
Great location that feels like a midway point between the more touristy aspects of Condado and the beach, and more traditional city vibes of places like Calle Cerra. Excellent staff, everyone is nice, personable and helpful, especially NInoshka at the front desk. Nice rooftop with a 360 view that gives you a long view towards the beach on one side, and the mountains on the other, with all sorts of highrise architecture and cityscape in between. My room was a good size with a comfortable bed, standard furnishings, comfortable use-of-space bathroom and a good view of the city area around Condado Beach (before you hit the beach itself). Housekeeping is consistent with the quality of cleaning, and of course if you want to sleep in after a night out you can put up the sign to skip your room for the day. I'd stay again👏

Reviewed on Apr 5, 2025

DoubleTree by Hilton San Juan
4.0-star property

DoubleTree by Hilton San Juan

8.8/10 Excellent! (1,011 reviews)

Aug 30 - Sep 6

7 night stay

Jacksonville (JAX) to San Juan (SJU)

Frontier Airlines • Non-stop • Coach

San Juan (SJU) to Jacksonville (JAX)

Delta • Non-stop • Coach
Save 100% on your flight
per person
found 1 day ago
Staff was great. Room was clean. Would Definitely stay here again. Right across from supermarket. Beach shuttle was reliable. Cafe downstairs served a good brunch.

Reviewed on May 12, 2025

Ola Boutique Hotel
4.5-star property

Ola Boutique Hotel

9/10 Wonderful! (429 reviews)

Aug 28 - Aug 30

2 night stay

Jacksonville (JAX) to San Juan (SJU)

Frontier Airlines • Non-stop • Coach

San Juan (SJU) to Jacksonville (JAX)

United • Non-stop • Coach
Save 100% on your flight
per person
found 14 hours ago
Excellent accommodations. Room was a little small but convenience & extra courteous staff made up for it. Theyre just genuinely warm. Silk restaurant across is phenomenal & grocery is also just across. Walk to Condado area

Reviewed on Jan 4, 2025

Don't see what you're looking for?
See all available trips from Jacksonville to San Juan
View all trips

More About Flying To San Juan from Jacksonville

Route Information for Flights from Jacksonville to San Juan

Origin Airport IATA Code
JAX
Destination Airport IATA Code
SJU
Distance
Direct Flight Airlines
Earliest Flight Arrival
Latest Flight Arrival

Jacksonville to San Juan

When you’re searching for Jacksonville to San Juan flights for your family vacation, check out the guaranteed low prices at Orbitz. If you are looking for the best prices on hotels too, you’ll be sure to find great deals to suit your budget. You’ll also benefit from the following features:

Suitable Schedules

Orbitz simplifies the process of finding and booking budget flights from Jacksonville to San Juan. Since we monitor hundreds of flight fares, you can compare several flights from a range of different airlines to find the best fares and most suitable departure and arrival times. Mix and match your departure and return flight for even more discounts and travel flexibility.

Mobile Apps

Taking a lunch break or waiting to pick up the kids? Orbitz’s cutting-edge mobile tools will help you search for cheap Jacksonville to San Juan flights anywhere you are. Get exclusive mobile deals on flights, hotels, vacation packages, and cruises too.

Flight Alerts

Orbitz won’t leave you wondering whether your flight will take off on time. We can send you free alerts about your flights from Jacksonville to San Juan to your mobile phone and email. Whether your flights from Jacksonville to San Juan are running just a few minutes to a few hours late, we will let you know.

Miles and Points

If you travel regularly, you can still earn miles and points when you book qualifying Jacksonville to San Juan flights. Enter your frequent flyer number with your reservation to see the miles rack up.

Frequently asked questions

Am I able to catch a flight from Jacksonville to San Juan now?
Our Covid-19 Travel Advisor will answer all your questions about travel restrictions and quarantine requirements when flying from Jacksonville to San Juan.
Are there non-stop flights from Jacksonville to San Juan?
Yes, if you're traveling from Orlando Intl. Airport to SJU, you'll only have one flight number to bear in mind. There are 3 airlines with nonstop services to choose from. Some of the best are:
  • JetBlue
  • Spirit Airlines
  • Frontier Airlines
  • JetBlue
  • Spirit Airlines
  • Frontier Airlines
What is the shortest flight from Jacksonville to San Juan?
From Jacksonville, the eclectic sights and sounds of San Juan are at least 3 hours and 45 minutes away. Secure your favorite seat, or maybe even upgrade to one with a little more legroom, and travel to your destination in pure comfort.
What airlines fly from Jacksonville to San Juan most frequently?
There are a couple of airlines offering frequent flights from Orlando, FL Airport (MCO-Orlando Intl.) to Isla Verde Intl. Airport, including JetBlue (B6). Popular with travelers, it operates 182 flights on this route each month. If you can't find the right flight for you there, look into the airfares with Spirit Airlines (NK). This carrier is a terrific alternative and has 121 flights between Jacksonville and San Juan each month.
If I am not able to travel due to COVID-19, can I cancel my flight to San Juan?
We get that traveling right now has its challenges, so it's good to know that many reservations booked through us are able to be cancelled or changed. If your travel plans to San Juan have been affected by COVID-19, a lot of airlines are making things easier by offering credits to use at a later date. Just sign in to your account and you'll quickly see what options are available. Our Customer Service Portal is the place to go for more information.
Are there flights to San Juan with flexible change policies?
In most cases you'll have the option to reschedule your flight to San Juan without a change fee. All you have to do then is pay the difference between the old flight and the new one. Look for the "no change fees" filter and book with confidence.
What is the cheapest day of the week to fly?
Consider flying out early in the week to save on your airfare. Orbitz data from 2020 shows that Monday is the cheapest day to depart, followed by Tuesday. Saturday showed the highest average ticket prices likely because many travelers prefer to start their vacation on a weekend.
What is the cheapest month to fly?
We won't keep you guessing, according to Orbitz data the cheapest month to fly is August. Perfect for those who need a weekend getaway, or just a break from it all before the weather changes. Be aware that the most expensive time to fly is the height of summer, with ticket prices peaking in the month of June.
How can I save money on flights?
To really save big on your next vacation, think outside the box. Select two different airlines or fare types for your return trip and you'll generally get a much better deal. Those who tried this on Orbitz in 2020 saved up to 45% on their airfares. Get mixing and matching today!

Fare, taxes & fees: Fares include all taxes and fees, except baggage fees. Rates shown reflect fares found by other Orbitz users over the past 7 days. Due to rapidly changing airline prices & seat availability, these fares may no longer be available.

Refunds/changes/cancellations: Itinerary changes, if permitted for the fare, will have a $30 service fee charged by Orbitz. Additional airline charges may apply.

Other conditions: Schedules, fares and rules are subject to change without notice. Seats are limited and may not be available on all flights/dates or in all markets. Lower fares may be available. Fares will not be honored retroactively or in exchange for any wholly/partially unused ticket. Tickets are non-transferable and non-refundable. Fare rules are provided for the selected itinerary before booking.