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Comfort Inn San Diego Airport At The Harbor

3.5 star property
Bayside hotel with a rooftop terrace, near Shelter Island

Choose dates to view prices

Photo gallery for Comfort Inn San Diego Airport At The Harbor

Exterior
Free daily full breakfast
In-room safe, desk, laptop workspace, iron/ironing board
Exterior
Exterior

Reviews

7.8 out of 10
Good

Popular amenities

  • Pool
  • Pet friendly
  • Free WiFi
  • Air conditioning
  • Parking available

Explore the area

View in a map
San Diego, CA
  • Place, San Diego Bay
    ‪7 min walk‬
  • Place, San Diego Yacht Club
    ‪8 min walk‬
  • Place, Shelter Island
    ‪13 min walk‬
  • Airport, San Diego, CA (SAN-San Diego Intl.)
    ‪5 min drive‬

Room options

View all photos for Standard Room, 1 King Bed, Non Smoking

In-room safe, desk, laptop workspace, iron/ironing board

Standard Room, 1 King Bed, Non Smoking

8.6 out of 10
Excellent
(132 reviews)
  • 250 sq ft
  • Sleeps 2
  • 1 King Bed

View all photos for Standard Room, 1 King and 1 Double Bed, Non Smoking

In-room safe, desk, laptop workspace, iron/ironing board

Standard Room, 1 King and 1 Double Bed, Non Smoking

7.8 out of 10
Good
(6 reviews)
  • 300 sq ft
  • Sleeps 3

View all photos for Deluxe Room, 1 King Bed, Non Smoking

In-room safe, desk, laptop workspace, iron/ironing board

Deluxe Room, 1 King Bed, Non Smoking

7.0 out of 10
Good
(22 reviews)
  • 300 sq ft
  • Sleeps 2
  • 1 King Bed

View all photos for Standard Room, 2 Double Beds, Non Smoking

In-room safe, desk, laptop workspace, iron/ironing board

Standard Room, 2 Double Beds, Non Smoking

8.4 out of 10
Very good
(13 reviews)
  • 300 sq ft
  • Sleeps 4
  • 2 Double Beds

View all photos for Deluxe Room, 1 King Bed and Bunk Bed, Non Smoking

Deluxe Room, 1 King Bed and Bunk Bed, Non Smoking | In-room safe, desk, laptop workspace, iron/ironing board

Deluxe Room, 1 King Bed and Bunk Bed, Non Smoking

8.6 out of 10
Excellent
(7 reviews)
  • 300 sq ft
  • Sleeps 4
  • 1 King Bed and 1 Twin Bunk Bed

View all photos for Standard Room, 2 Queen Beds, Non Smoking

In-room safe, desk, laptop workspace, iron/ironing board

Standard Room, 2 Queen Beds, Non Smoking

7.4 out of 10
Good
(8 reviews)
  • 300 sq ft
  • Sleeps 4
  • 2 Queen Beds

View all photos for Standard Room, 1 King Bed, Accessible, Non Smoking (Roll-in Shower)

In-room safe, desk, laptop workspace, iron/ironing board

Standard Room, 1 King Bed, Accessible, Non Smoking (Roll-in Shower)

9.8 out of 10
Exceptional
(6 reviews)
  • 250 sq ft
  • Sleeps 2
  • 1 King Bed

View all photos for Deluxe Room, 2 Queen Beds, Non Smoking, Pool View

In-room safe, desk, laptop workspace, iron/ironing board

Deluxe Room, 2 Queen Beds, Non Smoking, Pool View

  • 300 sq ft
  • Sleeps 4
  • 2 Queen Beds

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About the neighborhood

San Diego

Located in Point Loma within a mile (2 km) of Shelter Island, Comfort Inn San Diego Airport At The Harbor is within a few miles (5 km) of other popular sights such as Marine Corps Recruit Depot. This 3.5-star hotel has 46 guestrooms and offers conveniences like free breakfast, an outdoor pool, and a rooftop terrace.

What's nearby

  • San Diego Bay - 7 min walk - 0.4 miles
  • San Diego Yacht Club - 8 min walk - 0.5 miles
  • Shelter Island - 13 min walk - 0.7 miles
  • Humphreys Concerts by the Bay - 13 min walk - 0.7 miles
  • Rock Church - 19 min walk - 1.0 mile

Getting around

  • County Center - Little Italy Station - 6 min drive
  • Old Town Transit Center - 11 min drive
  • San Diego Intl. Airport (SAN) - 10 min drive

Restaurants

  • ‪Starbucks - ‬13 min walk
  • ‪Bali Hai Restaurant - ‬19 min walk
  • ‪Better Buzz Coffee - ‬1 min walk
  • ‪7-Eleven - ‬9 min walk
  • ‪McDonald's - ‬4 min walk

About this property

Comfort Inn San Diego Airport At The Harbor

Bayside hotel with a rooftop terrace, near Shelter Island
Guests staying at Comfort Inn San Diego Airport At The Harbor enjoy an outdoor pool, a rooftop terrace, and free WiFi in public areas. Self parking is offered for USD 10.00 per night. Multilingual staff at the front desk are standing by 24/7 to help with tours or tickets, securing valuables, and dry cleaning/laundry. If you like to take your furry friend along on your adventures, this pet-friendly property offers food and water bowls and an off-leash area. Additional amenities include express check-out, free newspapers, and laundry facilities.
Guests can expect to find 50-inch flat-screen TVs with cable channels. Bathrooms have hair dryers and free toiletries. Other amenities include coffee makers, free weekday newspapers, and free local calls.
Recreational amenities at the hotel include an outdoor pool.

The recreational activities listed below are available either on site or nearby; fees may apply.

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Best Western Yacht Harbor Hotel
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  • Parking included
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Total with taxes and fees
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Property amenities

Internet

  • Available in all rooms: WiFi
  • Available in some public areas: Free WiFi

Parking and transportation

  • Uncovered self parking on site (USD 10 per night; includes in/out privileges)
  • Limited onsite self parking (max 1 space per unit)
  • Wheelchair-accessible parking and van parking available

Food and drink

  • Free full breakfast available daily 6:30 AM to 9:30 AM

Things to do

  • Outdoor pool

Family friendly

  • Fenced pool
  • In-room crib
  • Laundry facilities
  • Outdoor pool
  • Pool gate

Conveniences

  • 24-hour front desk
  • Free newspapers in lobby
  • Guidebooks
  • Laundry facilities
  • Luggage storage
  • Safe at front desk
  • Vending machine

Guest services

  • Dry cleaning/laundry service
  • Housekeeping (daily)
  • Multilingual staff
  • Tour and ticket assistance

Outdoors

  • Barbecue grill
  • On the bay
  • Outdoor furniture
  • Pool loungers
  • Pool umbrellas
  • Rooftop terrace

Accessibility

  • If you have requests for specific accessibility needs, please contact the property using the information on the reservation confirmation received after booking.
  • 2 accessible parking spaces
  • Assistive listening devices
  • Braille/raised signage
  • Handrails in stairways
  • Lever door handles
  • Pool hoist on site
  • Stair-free path to entrance
  • Upper floors accessible by stairs only
  • Well-lit path to entrance
  • Wheelchair accessible (may have limitations)
  • Wheelchair-accessible parking
  • Wheelchair-accessible path of travel
  • Wheelchair-accessible pool
  • Wheelchair-accessible registration desk
  • Wheelchair-accessible van parking

More

  • 2 floors
  • Smoking not allowed

Room amenities

Bedroom

  • Bedsheets provided
  • Free crib

Bathroom

  • Free toiletries
  • Hair dryer
  • Private bathroom
  • Shower
  • Towels provided

Entertainment

  • 50-inch flat-screen TV with premium cable channels

Food and drink

  • Coffee/tea maker

More

  • Access via exterior corridors
  • Air conditioning (climate-controlled)
  • Desk
  • Free local calls
  • Free weekday newspapers
  • Iron/ironing board
  • Laptop workspace
  • Laptop-compatible safe
  • Laundry detergent
  • Phone
  • Window screens

Policies

Check-in

Check-in start time: 3:00 PM; Check-in end time: 7:00 AM
Early check-in subject to availability
Early check-in is available for a fee
Late check-in subject to availability

Check-out

Check-out before 11 AM
Contactless check-out available
Late check-out subject to availability
A late check-out fee will be charged
Express check-out available

Special check-in instructions

An adult age 18 or older must assume all liability for the booking
Front desk staff will greet guests on arrival at the property
Information provided by the property may be translated using automated translation tools

Access methods

Staffed front desk

Pets

  • This property welcomes pets for USD 27.68 per pet, per night, plus a one-time cleaning fee of USD 27.68 and a deposit of USD 100 per stay
  • Dogs only
  • 1 total (50 lbs is the maximum weight per pet)
  • Pets may not be left unsupervised
  • Food and water bowls and an off-leash area are available
  • Certain rooms only
  • Guests can request a pet-friendly room by contacting the property at the number on the booking confirmation
  • Service animals exempt from fees

Children and extra beds

  • One child 18 years old or younger stays free when using existing bedding
  • Rollaway/extra beds are available for USD 10.0 per day
  • Free cribs/infant beds are available

Property payment types

Important information

Optional extras

These fees and deposits will be charged at check-in, check-out, or the time of service.

  • Uncovered self parking fee: USD 10.00 per night (in/out privileges)
  • Pet deposit: USD 100 per stay
  • Pet fee: USD 27.68 per pet, per night plus USD 27.68 one-time cleaning fee
  • Service animals are exempt from fees
  • Early check-in is available for a fee (subject to availability)
  • Late check-out is available for a fee (subject to availability)
  • Rollaway bed fee: USD 10.0 per day

This list may not be comprehensive. Fees and deposits might not include tax and are subject to change.

You need to know

Extra-person charges may apply and vary depending on property policy
Government-issued photo identification and a credit card, debit card, or cash deposit may be required at check-in for incidental charges
Special requests are subject to availability upon check-in and may incur additional charges; special requests cannot be guaranteed
The name on the credit card used at check-in to pay for incidentals must be the primary name on the guestroom reservation
This property accepts credit cards; cash is not accepted
Cashless transactions are available
Safety features at this property include a smoke detector and window guards
This property affirms that it follows the cleaning and disinfection practices of Commitment to Clean (Choice)
Please note that cultural norms and guest policies may differ by country and by property; the policies listed are provided by the property
  • Check-in: 3:00 PM—-7:00 AM
  • Check-out: 11 AM
The front desk is open 24 hours a day, and checking out is easy with express services. Driving? This property offers parking (fees apply).

We should mention

Details about charges, deposits, or other important information:

  • This property is managed by a professional host. The provision of housing is linked to their trade, business, or profession.
  • Charges for extra guests may apply and vary depending on the property's policy.
  • A cash deposit, credit card, or debit card for incidental charges, as well as a government-issued photo ID, may be required at check-in.
  • Special requests are subject to availability at the time of check-in and can't be guaranteed. Certain requests may come with additional charges.
  • This property accepts credit cards. Cash is not accepted. 
  • The credit card used at check-in for incidentals must be in the name of the primary guest who made the reservation.
  • Onsite safety features include a smoke detector and window guards.
  • Cashless payment methods are available for all transactions.
  • This property affirms that it follows the cleaning and disinfection practices of Commitment to Clean (Choice).

Additional information about polices, regulations, and more:

  • Pool access available from 9:00 AM to 10:00 PM.
  • Registered guests are the only ones allowed in guestrooms.
  • There are no elevators.

Property is also known as

Comfort Inn San Diego Harbor Motel
Comfort Inn Harbor Motel San Diego
Comfort Inn Harbor San Diego
Comfort Inn San Diego
Comfort Inn San Diego Harbor

Frequently asked questions

Is free cancellation available at Comfort Inn San Diego Airport At The Harbor?

Comfort Inn San Diego Airport At The Harbor offers free cancellation on certain room rates. For more details, take a look at the cancellation policy on Orbitz.

How much does it cost to stay at Comfort Inn San Diego Airport At The Harbor?

As of Feb 18, 2026, prices found for a 1-night stay for 2 adults at Comfort Inn San Diego Airport At The Harbor on Mar 8, 2026 start from $91.03, excluding taxes and fees. This price is based on the lowest nightly price found in the last 24 hours for stays in the next 30 days. Prices are subject to change. Choose your dates for more accurate prices.

What's there to do within easy reach of Comfort Inn San Diego Airport At The Harbor?

This hotel is situated in Point Loma within a short 17-minute walk of Shelter Island and also 6 minutes on foot from San Diego Bay. You'll also find Port of San Diego and Mission Bay within a short drive.

Is there parking available at Comfort Inn San Diego Airport At The Harbor?

Yes, uncovered parking is offered for USD 10.00 per night with in/out privileges. Though parking is limited per unit, accessible parking is also available. You'll find a max of 1 space per unit.

Does Comfort Inn San Diego Airport At The Harbor have a casino?

No, Comfort Inn San Diego Airport At The Harbor doesn't have a casino.

Will I find an indoor pool at Comfort Inn San Diego Airport At The Harbor?

No, this hotel doesn't have an indoor pool; however, there is an outdoor pool. Guests have pool access between 9:00 AM and 10:00 PM.

Is Comfort Inn San Diego Airport At The Harbor good for couples?

Couples staying at this hotel will appreciate amenities like an outdoor pool plus some guestrooms include private pools and pool views.

Does Comfort Inn San Diego Airport At The Harbor have a hot tub?

No, there isn't a spa tub at this hotel.

Does Comfort Inn San Diego Airport At The Harbor feature a restaurant that includes a breakfast menu?

Comfort Inn San Diego Airport At The Harbor offers free full breakfasts each morning though there is no restaurant.

Will Comfort Inn San Diego Airport At The Harbor allow pets to stay for free?

Although they can't stay for free, dogs are welcome at Comfort Inn San Diego Airport At The Harbor for a fee of USD 27.68 per pet, per night. The property also provides an off-leash area and food and water bowls. A deposit of USD 100 per stay is collected.

Does Comfort Inn San Diego Airport At The Harbor have connecting rooms?

No, there aren't connecting guestrooms at this hotel.

How close is the airport from Comfort Inn San Diego Airport At The Harbor?

The closest major airport to Comfort Inn San Diego Airport At The Harbor is San Diego Intl. Airport (SAN), which is 2.5 mi away (10 minutes by car). Another top airport is San Diego, CA (MYF-Montgomery Field), which is located 12.1 mi away (23-minute drive).

Can I book a room with a balcony at Comfort Inn San Diego Airport At The Harbor?

No, at Comfort Inn San Diego Airport At The Harbor, there aren't any guestrooms that list a balcony.

Comfort Inn San Diego Airport At The Harbor Reviews

Reviews

7.8

Good

Rating 10 - Excellent. 538 out of 1307 reviews
Rating 8 - Good. 337 out of 1307 reviews
Rating 6 - Okay. 224 out of 1307 reviews
Rating 4 - Poor. 95 out of 1307 reviews
Rating 2 - Terrible. 113 out of 1307 reviews

8.0/10

Cleanliness

8.4/10

Staff & service

7.0/10

Amenities

7.2/10

Property conditions & facilities

Reviews

8/10 Good

Denise

Traveled with partner
Liked: Cleanliness, amenities, property conditions & facilities
Clean room, kind staff, great shower with hot water!
Stayed 1 night in Jan 2026

10/10 Excellent

Jaime

good facilities, reasonable price and good service
Stayed 1 night in Dec 2025

8/10 Good

Tia S

Liked: Cleanliness, amenities, property conditions & facilities
Friendly staff
Stayed 1 night in Nov 2025

8/10 Good

Erik

Liked: Staff & service, property conditions & facilities
Stayed 2 nights in Nov 2025

8/10 Good

Nancy J., Wheat Ridge

Liked: Cleanliness, staff & service, property conditions & facilities
Front desk service was excellent both days
Stayed 1 night in Nov 2025

10/10 Excellent

Brad

Traveled with family
Liked: Cleanliness, amenities, property conditions & facilities
The staff was excellent and the room was clean and comfortable
Stayed 3 nights in Nov 2025

6/10 Okay

Rogelio Manuel

Traveled with family and small children, Traveled with partner, Traveled with family
Disliked: Cleanliness, property conditions & facilities
Staff was great. Room could be improved. No fan in bathroom made it all humid and shower didn’t have a door and water was everywhere. Floors were a little dirty. Other than that stay was great. Staff didn’t bother us and was very helpful when needed. Breakfast was good! Thanks for having us.
Stayed 5 nights in Nov 2025

2/10 Terrible

Sarni

Traveled with family
Liked: Staff & service
Disliked: Cleanliness, amenities
Staff were lovely. The room...ehhhh. blood on the sheets and black hair
Stayed 1 night in Nov 2025

6/10 Okay

Ernesto

Business traveler
Liked: Staff & service
This location is good but nothing to write home about. The facility needs some modernization.
Stayed 1 night in Nov 2025

6/10 Okay

Lisa, Colorado Springs

Stayed 2 nights in Oct 2025

8/10 Good

Silvia

Liked: Cleanliness
It was a great experience especially for the price! Front desk Thalia was very kind and The location was okay. I enjoyed my room! Thank you :)
Stayed 2 nights in Nov 2025

8/10 Good

Lindsey

Stayed 1 night in Oct 2025

10/10 Excellent

Gabrielle

Liked: Cleanliness, staff & service, amenities
Breakfast was spectacular, central to many things I wanted to see in San Diego, super friendly staff, clean rooms and cozy bed. My one and only complaint was that the A/C/ fan didn't work in my room. It was a bargain finding this hotel.
Stayed 3 nights in Nov 2025

10/10 Excellent

Brian James

Liked: Cleanliness, amenities, property conditions & facilities
Very good value and location.
Stayed 1 night in Nov 2025

10/10 Excellent

Tanya

Liked: Amenities
The staff is GREAT
Stayed 4 nights in Nov 2025

8/10 Good

Christopher

Liked: Cleanliness, staff & service, property conditions & facilities
Older hotel, but very clean and good area.
Stayed 5 nights in Oct 2025

10/10 Excellent

Angeles

Traveled with partner
Liked: Cleanliness, amenities, property conditions & facilities
Yes it was clean and tidy everything was great breakfast was good and has some variety of options pretty good for the price..
Stayed 3 nights in Nov 2025

6/10 Okay

Luis

Traveled with family
Liked: Cleanliness
Disliked: Amenities
Walking distance to very good restaurants and a donut shop and liquor store!
Stayed 2 nights in Nov 2025

4/10 Poor

Jeremy

Disliked: Amenities
Breakfast area was way too small. Staff struggled to keep food stocked. Room wasn't as nice as photos. Parking was an extra charge. Thought is was included. Absolutely no view from room. Ice machine wasn't working.
Stayed 3 nights in Nov 2025

10/10 Excellent

Lois

Traveled with family
Liked: Cleanliness, staff & service
clean comfy bed easy check in/out
Stayed 3 nights in Nov 2025

10/10 Excellent

William

Liked: Cleanliness, amenities, property conditions & facilities
All the above, excellent hotel, will definitely be back
Stayed 3 nights in Nov 2025

8/10 Good

Charity

Traveled with family
Liked: Cleanliness, staff & service, amenities
Room was clean. Beds were comfy. Bathroom door didn’t close all the way. Pretty quiet. About 10 minutes away from lots of popular places. Staff were excellent, very nice. Price was great for the room but location made it worth it.
Stayed 3 nights in Nov 2025

10/10 Excellent

Kobie

Stayed 2 nights in Nov 2025

10/10 Excellent

Elizabeth

Stayed 1 night in Sep 2025

8/10 Good

Gerald

Liked: Cleanliness, amenities, property conditions & facilities
Clean, friendly staff would recommend
Stayed 3 nights in Nov 2025

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