Located in Point Loma, Comfort Inn San Diego At The Harbor is within a few miles (5 km) of popular sights such as Ocean Beach Park and Old Town San Diego State Park. This 46-room motel has private in-room pools along with an outdoor pool and free in-room WiFi. It's in central San Diego and also close to Seaworld and Rock Church.


Free buffet breakfast is included with your stay.


All 46 individually decorated rooms provide private pools, refrigerators, and coffee makers. 32-inch flat-screen TVs come with cable channels, and guests can stay connected with free WiFi. Bathrooms offer hair dryers and free toiletries. Free local calls, laptop-compatible safes, and ironing boards are other standard amenities.

Property features

At Comfort Inn San Diego At The Harbor, guests have access to an outdoor pool, a rooftop terrace, and free WiFi in public areas. There's free parking, and an airport shuttle (available on request) for USD 5 per person one way. Multilingual staff at the front desk are standing by 24/7 to help with dry cleaning/laundry, tours or tickets, and luggage storage. Additional amenities include coffee/tea in a common area, express check-in, and express check-out.


  • Free buffet breakfast
  • Free WiFi in rooms and public areas
  • Free parking
  • Outdoor pool

Comfort Inn San Diego At The Harbor

5102 N Harbor Dr San Diego CA 92106

Hotel Amenities

Hotel Amenities

Guests can enjoy a complimentary breakfast. Public areas are equipped with complimentary high-speed wireless Internet access. For a surcharge, the property provides a roundtrip airport shuttle (available on request) and a cruise ship terminal shuttle. This San Diego motel also offers an outdoor pool, a rooftop terrace, and tour/ticket assistance. Complimentary self parking is available on site.

Comfort Inn San Diego At The Harbor is a smoke-free property.

  • Airport transportation (surcharge) 
  • Total number of rooms - 46 
  • Number of floors - 2 
  • Express check-in 
  • Express check-out 
  • Cruise terminal shuttle (surcharge) 
  • Ferry terminal shuttle (surcharge) 
  • Free WiFi 
  • Luggage storage 
  • 24-hour front desk 
  • Multilingual staff 
  • Rooftop terrace 
  • Free self parking 
  • Free parking nearby 
  • Smoke-free property 
  • Coffee/tea in common areas 
  • Free newspapers in lobby 
  • Free breakfast 
  • Dry cleaning/laundry service 
  • Tours/ticket assistance 
  • Laundry facilities 
  • Outdoor pool 

Family Friendly Amenities

  • Family Hotel  
  • Outdoor pool  
  • Free Wi-Fi  
  • Laundry facilities  
  • Refrigerator  
  • Cribs/infant beds (complimentary)  


Available in all rooms: Free WiFi

Available in some public areas: Free WiFi


Free self parking, Free parking nearby

Room Amenities

Comfort Inn San Diego At The Harbor offers 46 air-conditioned accommodations, which are accessible via exterior corridors and feature private pools and laptop-compatible safes. Each accommodation is individually furnished and decorated. 32-inch flat-screen televisions come with premium cable channels. Refrigerators and coffee/tea makers are provided. Bathrooms include showers, complimentary toiletries, and hair dryers.

Guests can surf the web using the complimentary wireless high-speed Internet access. Business-friendly amenities include desks and phones; free local calls are provided (restrictions may apply). Additionally, rooms include irons/ironing boards and blackout drapes/curtains. Housekeeping is provided daily.

  • Air conditioning 
  • Access via exterior corridors 
  • Phone 
  • Premium TV channels 
  • Refrigerator 
  • Coffee/tea maker 
  • Private bathroom 
  • Free toiletries 
  • Hair dryer 
  • Iron/ironing board 
  • Free local calls 
  • Private pool 
  • Flat-panel TV 
  • In-room safe (laptop compatible) 
  • In-room climate control (air conditioning) 
  • Daily housekeeping 
  • Shower only 
  • Individually furnished 
  • Individually decorated 
  • Free cribs/infant beds 
  • Desk 
  • Blackout drapes/curtains 
  • Cable TV service 
  • Free WiFi 

Where to Eat

Guests are offered a complimentary buffet breakfast.

Nearby Things to Do

Recreational amenities at the motel include an outdoor pool.

The recreational activities listed below are available either on site or nearby; fees may apply.

  • Golfing nearby 
  • Kayaking nearby 
  • Sailing nearby 
  • Water skiing nearby 
  • Windsurfing nearby 
  • Mountain biking nearby 
  • Bicycle rentals nearby 
  • Scooter/moped rentals nearby 
  • Hiking/biking trails nearby 
  • Golf lessons available nearby 
  • Segway rental/tour nearby 
  • Boat tours nearby 
  • Rock climbing nearby 


To make special requests for accessibility needs, please note them at check-out when you book your room.

  • In-room accessibility 
  • Accessible bathroom 
  • Roll-in shower 

Hotel Policies


Check-in time ends at 7 AM

Check-in time starts at 3 PM

Special check-in instructions:

Airport shuttle service is available on request. Contact the property in advance to make arrangements.


Check-out time is 11 AM

Payment types


  • Pets not allowed (service animals welcome)

You need to know

Extra-person charges may apply and vary depending on property policy.

Government-issued photo identification and a credit card or cash deposit are required at check-in for incidental charges.

Special requests are subject to availability upon check-in and may incur additional charges. Special requests cannot be guaranteed.

Only service animals are allowed

No elevators


Optional extras

The following fees and deposits are charged by the property at time of service, check-in, or check-out.
  • Airport shuttle fee: USD 5 per person (one way)
  • Rollaway bed fee: USD 10 per stay
The above list may not be comprehensive. Fees and deposits may not include tax and are subject to change.

Hotel Name

  • Comfort Inn San Diego Harbor Motel
  • Comfort Inn Harbor Motel San Diego
  • Comfort Inn Harbor San Diego
  • Comfort Inn San Diego
  • Comfort Inn San Diego Harbor

We should mention

This property offers transfers from the cruise terminal, ferry terminal, and airport (surcharges may apply). Guests must contact the property with arrival details before travel, using the contact information on the booking confirmation. One child 18 years old or younger stays free when occupying the parent or guardian's room, using existing bedding. Only registered guests are allowed in the guestrooms.

Complimentary Appetizer

Book a room through this Web site and receive a card valid for a complimentary house appetizer with purchase of entrée at either Brigantine Seafood Restaurant or Miguel’s on Shelter Island Drive in Point Loma. Each card is good for up to six guests, limit one card per table. Not valid with Group Sales bookings.

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