$67 Cheap flights to Nagasaki Prefecture

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Top places to visit in Nagasaki Prefecture

Cheap flights to Nagasaki Prefecture from $67 One Way, $103 Round Trip

$103 return flights and $67 one-way flights to Nagasaki Prefecture were the cheapest prices found within the past 7 days, for the period specified. Prices and availability are subject to change. Additional terms apply.

Deals For This Weekend's Flights

OriginDestinationTravel DatesFlights From*
NRTFukuokaJune 21 to June 27$103
HNDFukuokaJune 21 to June 22$376
HNDOmuraJune 20 to June 23$450
HNDOmuraJune 20 to June 23$450
HKGFukuokaJune 21 to June 25$473
TPEFukuokaJune 21 to June 25$481
HNDMashikiJune 21 to June 23$504
HNDMashikiJune 21 to June 23$504
*Prices include taxes and fees

Find The Perfect Hotel For After Your Flight

Score Epic Nagasaki Prefecture Accommodation Deals

Cuore Nagasaki EkiMae

Cuore Nagasaki EkiMae

3 out of 5
7-3 Daikokumachi, Nagasaki Nagasaki Kyushu Island
Fully refundableReserve now, pay when you stay
The price is $43 total per night from Jun 21 to Jun 22
$43 total
per night
Jun 21 - Jun 22
Stay at this hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and in-room massages. Our guests praise the helpful staff and the clean rooms in our ...
8.6/10 Excellent! (1,000 reviews)
"Great room very close to Tokyo Station. Bathroom was very nice too."

Reviewed on May 20, 2026

Opens in a new windowCuore Nagasaki EkiMae
APA Hotel Nagasaki Dejima

APA Hotel Nagasaki Dejima

3 out of 5
8-17 Kabashima-machi Nagasaki Nagasaki-ken
Fully refundableReserve now, pay when you stay
The price is $49 total per night from Jul 1 to Jul 2
$49 total
per night
Jul 1 - Jul 2
Stay at this hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and a 24-hour front desk. Popular attractions Nagasaki Dejima and Dejima Museum are located ...
7.8/10 Good! (255 reviews)
"It's APA, so it was small, clean, and the staff is always helpful. Nothing extraordinary, but reliability good, especially for solo traveling. I believe there were 3 standard Japanese laundry machines with the built in dry function that doesn’t work too well on thicker cotton like pants. A couple ..."

Reviewed on May 21, 2026

Opens in a new windowAPA Hotel Nagasaki Dejima
Dormy Inn Nagasaki Shinchi Chinatown Hot Spring

Dormy Inn Nagasaki Shinchi Chinatown Hot Spring

3.5 out of 5
7-24 Douza-machi Nagasaki Nagasaki-ken
Fully refundableReserve now, pay when you stay
The price is $56 total per night from Jun 21 to Jun 22
$56 total
per night
Jun 21 - Jun 22
Stay at this hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and a sauna. Popular attractions Hamanomachi Arcade and Shianbashi Alley are located ...
8.8/10 Excellent! (1,007 reviews)
"Breakfast wast great room was just hot and hard to sleep"

Reviewed on Apr 18, 2026

Opens in a new windowDormy Inn Nagasaki Shinchi Chinatown Hot Spring
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S Peria Hotel Nagasaki

S Peria Hotel Nagasaki

3 out of 5
35-5 Goto-cho Nagasaki Nagasaki-ken
Fully refundableReserve now, pay when you stay
The price is $41 total per night from Jun 22 to Jun 23
$41 total
per night
Jun 22 - Jun 23
Stay at this hotel in Nagasaki. Enjoy free WiFi, parking (surcharge), and a 24-hour front desk. Our guests praise the helpful staff in our reviews. Popular attractions ...
8.6/10 Excellent! (965 reviews)
"Really good location close to both the station and Dejima, and quiet even though it was on a busy road (though we were on a high floor). We were very well looked after."

Reviewed on May 26, 2026

Opens in a new windowS Peria Hotel Nagasaki
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Score Epic Nagasaki Prefecture Accommodation Deals

Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch

3.5 out of 5
6 Huis Ten Bosch Sasebo Nagasaki-ken
Fully refundableReserve now, pay when you stay
$143 nightly
The price is $157 total per night from Jul 1 to Jul 2
$157 total
Jul 1 - Jul 2
Stay at this hotel in Sasebo. Enjoy free WiFi, 2 restaurants, and breakfast (surcharge). Our guests praise the helpful staff and the clean rooms in our reviews. ...
Opens in a new windowHotel Nikko Huis Ten Bosch
Hotel Okura JR Huis Ten Bosch

Hotel Okura JR Huis Ten Bosch

4 out of 5
10 Huis Ten Bosch cho Sasebo Nagasaki
Fully refundableReserve now, pay when you stay
$82 nightly
The price is $91 total per night from Jul 1 to Jul 2
$91 total
Jul 1 - Jul 2
Stay at this hotel in Sasebo. Enjoy free WiFi, 3 restaurants, and hot springs on site. Our guests praise the helpful staff and the clean rooms in our reviews. ...
9.2/10 Wonderful! (1,002 reviews)
"The room was cleaned daily! There wasn’t a pool but they did have an Onsen. If you have tattoos you cannot use the onsen."

Reviewed on Jun 16, 2026

Opens in a new windowHotel Okura JR Huis Ten Bosch
Hotel Forza Nagasaki

Hotel Forza Nagasaki

3.5 out of 5
4-11 Hamamachi Nagasaki
$38 nightly
The price is $42 total per night from Jun 28 to Jun 29
$42 total
Jun 28 - Jun 29
Stay at this hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and a 24-hour front desk. Our guests praise the helpful staff in our reviews. Popular ...
9/10 Wonderful! (1,000 reviews)
"It's located in the city centre and we found it very convenient. The room is quite good and not that small, which is out of expected."

Reviewed on Jun 13, 2026

Opens in a new windowHotel Forza Nagasaki
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Toyoko Inn Tsushima Izuhara

Toyoko Inn Tsushima Izuhara

3 out of 5
771-1 Imayashiki, Izuhara-machi Tsushima Nagasaki
$57 nightly
The price is $63 total per night from Jun 24 to Jun 25
$63 total
Jun 24 - Jun 25
Book a stay at this business-friendly hotel in Tsushima. Enjoy free breakfast, free WiFi, and parking (surcharge). Popular attraction Tsushima Folk History Museum ...
8.8/10 Excellent! (911 reviews)
"Staff was very helpful with check-in. Breakfast was a usual Asian breakfast. It was prepared well and tasted good."

Reviewed on Apr 10, 2026

Opens in a new windowToyoko Inn Tsushima Izuhara
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Family Friendly Hotels in Nagasaki Prefecture

Hotel Okura JR Huis Ten Bosch

Hotel Okura JR Huis Ten Bosch

4 out of 5
10 Huis Ten Bosch cho Sasebo Nagasaki
Fully refundableReserve now, pay when you stay
$82 nightly
The price is $91 total per night from Jul 1 to Jul 2
$91 total
Jul 1 - Jul 2
Stay at this hotel in Sasebo. Enjoy free WiFi, 3 restaurants, and hot springs on site. Our guests praise the helpful staff and the clean rooms in our reviews. ...
9.2/10 Wonderful! (1,002 reviews)
"The room was cleaned daily! There wasn’t a pool but they did have an Onsen. If you have tattoos you cannot use the onsen."

Reviewed on Jun 16, 2026

Opens in a new windowHotel Okura JR Huis Ten Bosch
Hotel Den Haag Huis Ten Bosch

Hotel Den Haag Huis Ten Bosch

4.5 out of 5
7-9 Huis Ten Bosch-cho Sasebo Nagasaki-ken
Fully refundableReserve now, pay when you stay
$134 nightly
The price is $149 total per night from Jul 11 to Jul 12
$149 total
Jul 11 - Jul 12
Book a stay at this luxury hotel in Sasebo. Enjoy free WiFi, breakfast (surcharge), and a free theme park shuttle. Our guests praise the helpful staff and the ...
Opens in a new windowHotel Den Haag Huis Ten Bosch
APA Hotel Nagasaki Dejima

APA Hotel Nagasaki Dejima

3 out of 5
8-17 Kabashima-machi Nagasaki Nagasaki-ken
Fully refundableReserve now, pay when you stay
$44 nightly
The price is $49 total per night from Jul 1 to Jul 2
$49 total
Jul 1 - Jul 2
Stay at this hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and a 24-hour front desk. Popular attractions Nagasaki Dejima and Dejima Museum are located ...
7.8/10 Good! (255 reviews)
"It's APA, so it was small, clean, and the staff is always helpful. Nothing extraordinary, but reliability good, especially for solo traveling. I believe there were 3 standard Japanese laundry machines with the built in dry function that doesn’t work too well on thicker cotton like pants. A couple ..."

Reviewed on May 21, 2026

Opens in a new windowAPA Hotel Nagasaki Dejima
Save an average of 15% on thousands of hotels when you're signed in
Hotel Bliss Villa Hasami

Hotel Bliss Villa Hasami

3 out of 5
567-1 Naganogo, Hasami-cho Hasami-cho Nagasaki
Fully refundableReserve now, pay when you stay
$39 nightly
The price is $43 total per night from Jul 5 to Jul 6
$43 total
Jul 5 - Jul 6
Stay at this hotel in Hasami-cho. Enjoy free WiFi, free parking, and breakfast (surcharge). Popular attractions Huis Ten Bosch and Onigitanada are located ...
9.2/10 Wonderful! (262 reviews)
"The staff here are amazing, courteous, helpful and kind. The rooms are spotless. Amazing stay. Will stay here again when I’m the area."

Reviewed on Nov 20, 2025

Opens in a new windowHotel Bliss Villa Hasami
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Need a Car For After Your Flight?

Nagasaki Prefecture

If you are looking for discount prices on flights to Nagasaki Prefecture then look no further than Orbitz. With some of the best deals available, cutting-edge technology, and great customer service, Orbitz makes booking Nagasaki Prefecture flights easy and affordable.

Booking Made Easy

With Orbitz’s Display Matrix, booking flights to Nagasaki Prefecture is simple. Just one glance gives you all the pricing information you need, including your discounts and savings. View all your options before selecting and booking your perfect Nagasaki Prefecture flights.

Manage Travel Plans on the Move

By using Orbitz’s free apps for iPhone and Android, and an easy-to-use mobile browser at m.orbitz.com, booking flights to Nagasaki Prefecture has never been so convenient. Check for updates and alerts wherever you are, or manage your booking quickly. And we also offer mobile exclusive deals on hotels, so don’t delay—book right away.

The Complete Package

Orbitz makes it stress-free to book Nagasaki Prefecture flights, and we can also help you figure out the rest of your trip just as easily. If you need great deals on hotels and car rentals following your flights to Nagasaki Prefecture, just add the details to your booking and search for the cheapest deals out there. And why waste time lining up for admission to attractions and events? With Orbitz, you can book tickets in advance and waltz straight in.

Low Price Guarantee

Booking your Nagasaki Prefecture flights with Orbitz guarantees low prices every day, all day—no matter when and where you book. You will always find the best deals available, coupled with extra great savings and discounts for all around great value.

Frequently asked questions

Which airlines fly to Nagasaki Prefecture?
There are 24 air carriers that make the journey to Nagasaki Airport (NGS). With this many to select from, there's a great chance you'll find a low-cost flight! Your Nagasaki Prefecture getaway awaits with one of these top carriers:

  • ANA - 175 flights to Nagasaki Prefecture per month
  • Japan Airlines - 174 flights to Nagasaki Prefecture per month
  • Oriental Air Bridge - 123 flights to Nagasaki Prefecture per month

What is the best airport to fly to in Nagasaki Prefecture?
Nagasaki Airport (NGS) is the major entry point for this terrific destination. Once you've walked out of the terminal, the options are endless when it comes to exploring Nagasaki Prefecture.
How much is a flight to Nagasaki Prefecture?
This week, prices ranged between $103 and $1,003 for a round-trip flight to Nagasaki Prefecture. Tickets one-way departing from Seoul (ICN) dipped to just $67.
How to book the cheapest flight to Nagasaki Prefecture?
With some of the most incredible flight deals around, you're guaranteed value for money with Orbitz. The following tips and hints will help you score cheap flights to Nagasaki Prefecture — and leave you with cash to spare:

  • Consider taking off from or landing at alternative airports to save on your airfare. Enter your preferred departure and arrival airports in the form fields, then choose the 'Nearby airports' function below. It will list the available options.
  • If your plans aren't cast in stone, click on the 'Show flexible dates' link to see the flight deals for different departure dates. Go with any suitable cheaper fare you find.
  • To filter your results, hit 'Show options.' You can search based on airlines, seating class, and nonstop and refundable flights. You can also select the time of day you'd like to fly under 'Sort & Filter' to the left.
  • Book as soon as you've decided on your travel dates. While you can get lucky now and then, tickets rarely fall in price as your date of departure approaches.
  • Make even more savings on your vacation by bundling your hotel, flights and car rentals into a package with Orbitz. Your budget will thank you for it.
  • If possible, avoid traveling in the most popular seasons. Airfares usually surge during school breaks, summer and around other vacation times like Easter and Thanksgiving.

How long is a flight to Nagasaki Prefecture?
How long you'll be in the air for will depend on many different things, including where you take off from. We've put together a list of flight times for some of the most common domestic routes to Nagasaki Prefecture:

  • Tokyo (HND-Haneda) to Nagasaki Airport (NGS) - 2 hours and 7 minutes
  • Osaka (ITM-Itami) to Nagasaki Airport (NGS) - 1 hour and 16 minutes
  • Tsushima (TSJ) to Nagasaki Airport (NGS) - 35 minutes

What is the best time to book a flight to Nagasaki Prefecture?
Generally speaking, January is the cheapest month to book your airfare. This is closely followed by February and August. Bear this in mind while you search for a cheap flight to Nagasaki Prefecture.
What day of the week is the cheapest to book a flight to Nagasaki Prefecture?
Make a booking on a Tuesday, Wednesday or Saturday. Generally, these are the cheapest days of the week to purchase airfares to Nagasaki Prefecture. The vacation of your dreams starts with a terrific flight deal!
What is the cheapest day of the week to fly to Nagasaki Prefecture?
According to Orbitz data from 2020, Monday is usually the best day for cheap flights to Nagasaki Prefecture. Tuesday also has more affordable airfares, while Saturday has the highest ticket prices. Even though flying out at the weekend may be easier to arrange, you'll have more cash to play with if you head out early in the week.
What is the cheapest month to fly to Nagasaki Prefecture?
According to Orbitz data, you'll want to fly out in August. This is generally the best month to score cheap flights to Nagasaki Prefecture. It's worth noting that the most expensive time to depart is in June.
Which airlines allow free cancellation?
Plans change, and we believe your ticket should be able to as well. That's why Orbitz makes it easy to search for airlines with no change fees and free cancellation. Simply enter your travel details and then select "Filter by flexible change policies." How's that for fuss-free?
What do I need for the flight to Nagasaki Prefecture?
The trick to having a stress-free flight is to arrive prepared. Here are a few handy tips to keep in mind before you take off:

  • In all cases you'll need a form of identification. How much? This depends on which airport you fly from. When booking, we suggest to put down the same name, gender and birth date as indicated on your government-issued ID.
  • Take a good book or a laptop crammed with your favorite films — it'll help to keep you entertained on your long journey to Nagasaki Prefecture. Or if you'd prefer to enjoy a nap, an eye mask will block out those bright cabin lights.
  • Temperatures in the cabin can go from hot to cold quickly, so it's wise to bring a hoodie. Also consider compression socks. They can help prevent your legs from getting achy.

How many direct flights are there to Nagasaki Prefecture?
You can catch one of 101 flights that travel straight to Nagasaki Prefecture each month. JAL, ANA and Oriental Air Bridge are just some of the airlines that will take you there in one go. Skymark Airlines, Solaseed Air and Peach Aviation are a few other carriers that fly nonstop.
How do I get cheap first-class/business deals to Nagasaki Prefecture?
If you think a first or business-class fare is out of your reach, think again. Here are some practical tips to help you land a premium flight to Nagasaki Prefecture for less:

  • Being flexible isn't confined to yoga. Have some room to move around your travel dates so you can snap up cheaper airfares when a big sale drops.
  • Low-cost airlines offer first or business-class seating at a fraction of the usual price. Skip the full-service carriers and consider these cheaper options.
  • Bid for an upgrade in online auctions or upgrade your ticket through your flight loyalty scheme.

What is the best time to go to Nagasaki Prefecture?
Nagasaki Prefecture is popular in June, August and September. If you're thinking of visiting during these months, it may be an idea to book early to ensure you get the most rewarding deals. Like to know what summertime's like in Nagasaki Prefecture? Average daily temperatures usually hover between 75 ºF and 80 ºF. Like most destinations in the Northern Hemisphere, summertime begins June 20 here.

Fare, taxes & fees: Fares include all taxes and fees, except baggage fees. Rates shown reflect fares found by other Orbitz users over the past 7 days. Due to rapidly changing airline prices & seat availability, these fares may no longer be available.

Refunds/changes/cancellations: Itinerary changes, if permitted for the fare, will have a $30 service fee charged by Orbitz. Additional airline charges may apply.

Other conditions: Schedules, fares and rules are subject to change without notice. Seats are limited and may not be available on all flights/dates or in all markets. Lower fares may be available. Fares will not be honored retroactively or in exchange for any wholly/partially unused ticket. Tickets are non-transferable and non-refundable. Fare rules are provided for the selected itinerary before booking.